Skip to content

Commit

Permalink
Deploying to gh-pages from @ 7a6f84a 🚀
Browse files Browse the repository at this point in the history
  • Loading branch information
maelle committed Dec 12, 2024
1 parent 2713fbe commit d413c94
Show file tree
Hide file tree
Showing 18 changed files with 376 additions and 1,259 deletions.
18 changes: 6 additions & 12 deletions browse/api.html
Original file line number Diff line number Diff line change
Expand Up @@ -222,12 +222,6 @@
<a href="../install/reproducibility.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">9</span>&nbsp; <span class="chapter-title">Reproducibility</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../install/dependencies.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Using dependencies from R-universe</span></span></a>
</div>
</li>
</ul>
</li>
Expand All @@ -243,37 +237,37 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/get-started.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/set-up.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/metadata.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/troubleshoot-build.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/terms.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/other-networks.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
</div>
</li>
</ul>
Expand Down
18 changes: 6 additions & 12 deletions browse/get-started.html
Original file line number Diff line number Diff line change
Expand Up @@ -188,12 +188,6 @@
<a href="../install/reproducibility.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">9</span>&nbsp; <span class="chapter-title">Reproducibility</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../install/dependencies.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Using dependencies from R-universe</span></span></a>
</div>
</li>
</ul>
</li>
Expand All @@ -209,37 +203,37 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/get-started.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/set-up.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/metadata.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/troubleshoot-build.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/terms.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/other-networks.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
</div>
</li>
</ul>
Expand Down
19 changes: 7 additions & 12 deletions browse/packages.html
Original file line number Diff line number Diff line change
Expand Up @@ -225,12 +225,6 @@
<a href="../install/reproducibility.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">9</span>&nbsp; <span class="chapter-title">Reproducibility</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../install/dependencies.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Using dependencies from R-universe</span></span></a>
</div>
</li>
</ul>
</li>
Expand All @@ -246,37 +240,37 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/get-started.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/set-up.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/metadata.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/troubleshoot-build.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/terms.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/other-networks.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
</div>
</li>
</ul>
Expand Down Expand Up @@ -379,6 +373,7 @@ <h3 data-number="5.3.2" class="anchored" data-anchor-id="how-does-r-universe-ana
<span id="cb1-6"><a href="#cb1-6" aria-hidden="true" tabindex="-1"></a><span class="do">## 4 libstdc++.so.6.0.28 libstdc++6 &lt;NA&gt; gcc 10-20200411-0ubuntu1</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
<p>In a nutshell, maketools calls <code>ldd</code> on the installed R package to see which <code>.so</code> files are linked (the 1st column above). Then it uses the distro package manager (for instance <code>dpkg</code>) to query the runtime package deb that provides this file (the second column), and the corresponding headers and source packages. So to emphasize, this does <strong>not</strong> use heuristics / guessing based on the package description.</p>
<p>The maketools vignette explains this in more detail: <a href="https://cran.r-project.org/web/packages/maketools/vignettes/sysdeps.html">Automatically determine run-time dependencies for R packages on Linux</a>.</p>
<p>See also <a href="../publish/troubleshoot-build.html#third-party-reqs">how to request a third-party system</a> that your package needs.</p>
</section>
</section>
<section id="all-the-documentation" class="level2" data-number="5.4">
Expand Down
18 changes: 6 additions & 12 deletions browse/rss-feeds.html
Original file line number Diff line number Diff line change
Expand Up @@ -188,12 +188,6 @@
<a href="../install/reproducibility.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">9</span>&nbsp; <span class="chapter-title">Reproducibility</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../install/dependencies.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Using dependencies from R-universe</span></span></a>
</div>
</li>
</ul>
</li>
Expand All @@ -209,37 +203,37 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/get-started.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/set-up.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/metadata.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/troubleshoot-build.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/terms.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/other-networks.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
</div>
</li>
</ul>
Expand Down
18 changes: 6 additions & 12 deletions browse/search.html
Original file line number Diff line number Diff line change
Expand Up @@ -191,12 +191,6 @@
<a href="../install/reproducibility.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">9</span>&nbsp; <span class="chapter-title">Reproducibility</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../install/dependencies.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Using dependencies from R-universe</span></span></a>
</div>
</li>
</ul>
</li>
Expand All @@ -212,37 +206,37 @@
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/get-started.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
<span class="menu-text"><span class="chapter-number">10</span>&nbsp; <span class="chapter-title">Why publish on R-universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/set-up.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
<span class="menu-text"><span class="chapter-number">11</span>&nbsp; <span class="chapter-title">Set up your own universe</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/metadata.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
<span class="menu-text"><span class="chapter-number">12</span>&nbsp; <span class="chapter-title">Make your package easier to discover: Control the metadata / SEO</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/troubleshoot-build.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
<span class="menu-text"><span class="chapter-number">13</span>&nbsp; <span class="chapter-title">Trouble shoot package builds</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/terms.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
<span class="menu-text"><span class="chapter-number">14</span>&nbsp; <span class="chapter-title">Package publishing rules</span></span></a>
</div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
<a href="../publish/other-networks.html" class="sidebar-item-text sidebar-link">
<span class="menu-text"><span class="chapter-number">16</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
<span class="menu-text"><span class="chapter-number">15</span>&nbsp; <span class="chapter-title">Relation to other networks</span></span></a>
</div>
</li>
</ul>
Expand Down
Loading

0 comments on commit d413c94

Please sign in to comment.