pre-commit autoupdate

related-sciences · Mar 22, 2024 · 6cf5ff5 · 6cf5ff5
1 parent c9df3f2
commit 6cf5ff5
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Showing 3 changed files with 16 additions and 16 deletions.
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -2,25 +2,25 @@ default_language_version:
   python: python3.10
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.4.0
+    rev: v4.5.0
     hooks:
       - id: check-merge-conflict
       - id: debug-statements
       - id: mixed-line-ending
       - id: check-case-conflict
       - id: check-yaml
-  - repo: https://github.com/charliermarsh/ruff-pre-commit
-    rev: v0.0.277
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.3.4
     hooks:
       - id: ruff
         args:
         - --fix
-  - repo: https://github.com/python/black
-    rev: 23.3.0
+  - repo: https://github.com/psf/black
+    rev: 24.3.0
     hooks:
       - id: black
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.4.1
+    rev: v1.9.0
     hooks:
       - id: mypy
         additional_dependencies:
@@ -30,7 +30,7 @@ repos:
           - pandas==1.5.3
           - pytest
   - repo: https://github.com/python-poetry/poetry
-    rev: '1.5.0'  # pre-commit autoupdate will not update to the latest version
+    rev: '1.8.2'  # pre-commit autoupdate will not update to the latest version
     hooks:
       - id: poetry-check
       - id: poetry-lock

diff --git a/nxontology_data/efo/efo.py b/nxontology_data/efo/efo.py
@@ -431,9 +431,9 @@ def create_slim_nxo(nxo: NXOntology[str]) -> NXOntology[str]:
             nxo.graph.subgraph(otar_slim_nodes).copy()
         )
         nxo_slim.graph.graph["name"] = "efo_otar_slim"
-        nxo_slim.graph.graph[
-            "note"
-        ] = "EFO OTAR Slim was created from EFO OTAR Profile by nxontology-data."
+        nxo_slim.graph.graph["note"] = (
+            "EFO OTAR Slim was created from EFO OTAR Profile by nxontology-data."
+        )
         return nxo_slim
 
 

diff --git a/nxontology_data/hgnc/hgnc.py b/nxontology_data/hgnc/hgnc.py
@@ -95,12 +95,12 @@ def _create_nxo_from_tables(
         nxo: NXOntology[int] = NXOntology()
         nxo.graph.graph["name"] = "hgnc_gene_group"
         nxo.graph.graph["description"] = "HGNC Gene Group / Family Ontology"
-        nxo.graph.graph[
-            "data_license_source"
-        ] = "https://www.genenames.org/about/license/"
-        nxo.graph.graph[
-            "data_license_url"
-        ] = "https://creativecommons.org/publicdomain/zero/1.0/"
+        nxo.graph.graph["data_license_source"] = (
+            "https://www.genenames.org/about/license/"
+        )
+        nxo.graph.graph["data_license_url"] = (
+            "https://creativecommons.org/publicdomain/zero/1.0/"
+        )
         nxo.graph.graph["data_license_spdx_id"] = "CC0-1.0"
         nxo.set_graph_attributes(
             node_identifier_attribute="id", node_name_attribute="name"