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[25.0 release] Update raisinbread dataset
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@ridz1208
ridz1208 committed Jul 19, 2023
1 parent 25a1c7d commit 4335fca
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Showing 21 changed files with 3,381 additions and 3,385 deletions.
2 changes: 1 addition & 1 deletion raisinbread/RB_files/RB_ConfigSettings.sql
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Expand Up @@ -118,6 +118,6 @@ INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMult
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (128,'default_cohort','Default cohort used when creating scan visit',1,0,'text',69,'Default cohort',13);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (129,'UserMaximumDaysInactive','The maximum number of days since last login before making a user inactive.',1,0,'text',1,'Maximum Days Before Making User Inactive',30);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (130,'DownloadPath','Where files are downloaded',1,0,'text',26,'Downloads',4);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (131,'EEGUploadIncomingPath', 'Path to the upload directory for incoming EEG studies', 1, 0, 'text', 26, 'EEG Incoming Directory', 15);
INSERT INTO `ConfigSettings` (`ID`, `Name`, `Description`, `Visible`, `AllowMultiple`, `DataType`, `Parent`, `Label`, `OrderNumber`) VALUES (131,'EEGUploadIncomingPath','Path to the upload directory for incoming EEG studies',1,0,'text',26,'EEG Incoming Directory',15);
UNLOCK TABLES;
SET FOREIGN_KEY_CHECKS=1;
328 changes: 164 additions & 164 deletions raisinbread/RB_files/RB_MRICandidateErrors.sql
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6 changes: 3 additions & 3 deletions raisinbread/RB_files/RB_candidate_consent_rel.sql
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@@ -1,8 +1,8 @@
SET FOREIGN_KEY_CHECKS=0;
TRUNCATE TABLE `candidate_consent_rel`;
LOCK TABLES `candidate_consent_rel` WRITE;
INSERT INTO `candidate_consent_rel` (`CandidateID`, `ConsentID`, `Status`, `DateGiven`, `DateWithdrawn`) VALUES ('587630', 1, 'no', '2015-12-31', '2015-12-31');
INSERT INTO `candidate_consent_rel` (`CandidateID`, `ConsentID`, `Status`, `DateGiven`, `DateWithdrawn`) VALUES ('300001', 1, 'yes', '2015-12-31', NULL);
INSERT INTO `candidate_consent_rel` (`CandidateID`, `ConsentID`, `Status`, `DateGiven`, `DateWithdrawn`) VALUES (300001,1,'yes','2015-12-31',NULL);
INSERT INTO `candidate_consent_rel` (`CandidateID`, `ConsentID`, `Status`, `DateGiven`, `DateWithdrawn`) VALUES (300005,1,'yes','2015-10-30',NULL);
INSERT INTO `candidate_consent_rel` (`CandidateID`, `ConsentID`, `Status`, `DateGiven`, `DateWithdrawn`) VALUES (587630,1,'no','2015-12-31','2015-12-31');
UNLOCK TABLES;
INSERT INTO `candidate_consent_rel` (`CandidateID`, `ConsentID`, `Status`, `DateGiven`, `DateWithdrawn`) VALUES ('300005', 1, 'yes', '2015-10-30', NULL);
SET FOREIGN_KEY_CHECKS=1;
23 changes: 6 additions & 17 deletions raisinbread/RB_files/RB_electrophysiology_uploader.sql
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@@ -1,21 +1,10 @@
SET FOREIGN_KEY_CHECKS=0;
TRUNCATE TABLE `electrophysiology_uploader`;
LOCK TABLES `electrophysiology_uploader` WRITE;

INSERT INTO `electrophysiology_uploader` (`UploadID`,`MetaData`,`UploadDate`,`SessionID`,`UploadLocation`,`Status`,`UploadedBy`)
values('1','Montreal','2023-04-19 14:43:22','1','archives/MTL001_300001_V1_bids_1681247806.tar.gz','Not Started','admin');

INSERT INTO `electrophysiology_uploader` (`UploadID`,`MetaData`,`UploadDate`,`SessionID`,`UploadLocation`,`Status`,`UploadedBy`)
values('2','Data Coordinating Center','2023-04-19 13:53:55','1347','archives/MTL001_300001_V1_bids_1681247865.tar.gz','Not Started','admin');

INSERT INTO `electrophysiology_uploader` (`UploadID`,`MetaData`,`UploadDate`,`SessionID`,`UploadLocation`,`Status`,`UploadedBy`)
values('3','Ottawa','2023-04-19 13:33:19','1189','archives/MTL001_300001_V1_bids_1681247891.tar.gz','Not Started','admin');

INSERT INTO `electrophysiology_uploader` (`UploadID`,`MetaData`,`UploadDate`,`SessionID`,`UploadLocation`,`Status`,`UploadedBy`)
values('4','Rome','2023-04-19 14:43:22','2','archives/MTL001_300001_V1_bids_1681248351.tar.gz','Not Started','admin');

INSERT INTO `electrophysiology_uploader` (`UploadID`,`MetaData`,`UploadDate`,`SessionID`,`UploadLocation`,`Status`,`UploadedBy`)
values('5','Montreal','2023-04-19 16:02:25','3','archives/MTL001_300001_V1_bids_1681249251.tar.gz','Not Started','admin');

LOCK TABLES `electrophysiology_uploader` WRITE;
INSERT INTO `electrophysiology_uploader` (`UploadID`, `UploadedBy`, `UploadDate`, `UploadLocation`, `Status`, `SessionID`, `Checksum`, `MetaData`) VALUES (1,'admin','2023-04-19 14:43:22','archives/MTL001_300001_V1_bids_1681247806.tar.gz','Not Started',1,NULL,'Montreal');
INSERT INTO `electrophysiology_uploader` (`UploadID`, `UploadedBy`, `UploadDate`, `UploadLocation`, `Status`, `SessionID`, `Checksum`, `MetaData`) VALUES (2,'admin','2023-04-19 13:53:55','archives/MTL001_300001_V1_bids_1681247865.tar.gz','Not Started',1347,NULL,'Data Coordinating Center');
INSERT INTO `electrophysiology_uploader` (`UploadID`, `UploadedBy`, `UploadDate`, `UploadLocation`, `Status`, `SessionID`, `Checksum`, `MetaData`) VALUES (3,'admin','2023-04-19 13:33:19','archives/MTL001_300001_V1_bids_1681247891.tar.gz','Not Started',1189,NULL,'Ottawa');
INSERT INTO `electrophysiology_uploader` (`UploadID`, `UploadedBy`, `UploadDate`, `UploadLocation`, `Status`, `SessionID`, `Checksum`, `MetaData`) VALUES (4,'admin','2023-04-19 14:43:22','archives/MTL001_300001_V1_bids_1681248351.tar.gz','Not Started',2,NULL,'Rome');
INSERT INTO `electrophysiology_uploader` (`UploadID`, `UploadedBy`, `UploadDate`, `UploadLocation`, `Status`, `SessionID`, `Checksum`, `MetaData`) VALUES (5,'admin','2023-04-19 16:02:25','archives/MTL001_300001_V1_bids_1681249251.tar.gz','Not Started',3,NULL,'Montreal');
UNLOCK TABLES;
SET FOREIGN_KEY_CHECKS=1;
30 changes: 15 additions & 15 deletions raisinbread/RB_files/RB_feedback_mri_comments.sql
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@@ -1,20 +1,20 @@
SET FOREIGN_KEY_CHECKS=0;
TRUNCATE TABLE `feedback_mri_comments`;
LOCK TABLES `feedback_mri_comments` WRITE;
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (532,134,'1.3.12.2.1107.5.2.32.35008.2009052710234557661341584.0.0.0',0.00316,NULL,2,2,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (533,134,'1.3.12.2.1107.5.2.32.35008.2009052710234557661341584.0.0.0',0.00316,NULL,3,8,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (856,155,'1.3.12.2.1107.5.2.32.35140.200905281809277943587276.0.0.0',0.499,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (983,257,'1.3.12.2.1107.5.2.32.35182.2011081519071350943359698.0.0.0',0.027,NULL,5,19,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (984,257,'1.3.12.2.1107.5.2.32.35182.2011081519071350943359698.0.0.0',0.027,NULL,5,20,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (1532,155,'1.3.12.2.1107.5.2.32.35140.200905281809277943587276.0.0.0',0.499,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (1539,192,'1.3.12.2.1107.5.2.32.35140.200905291749582811927772.0.0.0',0.499,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (1540,192,'1.3.12.2.1107.5.2.32.35140.200905291749582811927772.0.0.0',0.499,NULL,2,NULL,'on-brain tissue is very noisy','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (2034,336,'1.3.12.2.1107.5.2.32.35412.2010091413482152464230659.0.0.0',0.497,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (2035,336,'1.3.12.2.1107.5.2.32.35412.2010091413482152464230659.0.0.0',0.497,NULL,2,NULL,'this is a bit noisier than most t2 from UNC','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (16989,335,'1.3.12.2.1107.5.2.32.35412.201009141337447209029882.0.0.0',0.00316,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (16990,335,'1.3.12.2.1107.5.2.32.35412.201009141337447209029882.0.0.0',0.00316,NULL,2,NULL,'this is a bit noisier than most t1 from UNC','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (17018,412,'1.3.12.2.1107.5.2.32.35412.2010091414140972896788338.0.0.0',0.00316,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (17019,412,'1.3.12.2.1107.5.2.32.35412.2010091414140972896788338.0.0.0',0.00316,NULL,2,NULL,'slightly noisy','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (17020,412,'1.3.12.2.1107.5.2.32.35412.2010091414140972896788338.0.0.0',0.00316,NULL,6,NULL,'Candidate moved during scan','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (532,134,'1.3.12.2.1107.5.2.32.35008.2009052710234557661341584.0.0.0',0.00316,NULL,NULL,NULL,2,2,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (533,134,'1.3.12.2.1107.5.2.32.35008.2009052710234557661341584.0.0.0',0.00316,NULL,NULL,NULL,3,8,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (856,155,'1.3.12.2.1107.5.2.32.35140.200905281809277943587276.0.0.0',0.499,NULL,NULL,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (983,257,'1.3.12.2.1107.5.2.32.35182.2011081519071350943359698.0.0.0',0.027,NULL,NULL,NULL,5,19,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (984,257,'1.3.12.2.1107.5.2.32.35182.2011081519071350943359698.0.0.0',0.027,NULL,NULL,NULL,5,20,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (1532,155,'1.3.12.2.1107.5.2.32.35140.200905281809277943587276.0.0.0',0.499,NULL,NULL,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (1539,192,'1.3.12.2.1107.5.2.32.35140.200905291749582811927772.0.0.0',0.499,NULL,NULL,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (1540,192,'1.3.12.2.1107.5.2.32.35140.200905291749582811927772.0.0.0',0.499,NULL,NULL,NULL,2,NULL,'on-brain tissue is very noisy','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (2034,336,'1.3.12.2.1107.5.2.32.35412.2010091413482152464230659.0.0.0',0.497,NULL,NULL,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (2035,336,'1.3.12.2.1107.5.2.32.35412.2010091413482152464230659.0.0.0',0.497,NULL,NULL,NULL,2,NULL,'this is a bit noisier than most t2 from UNC','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (16989,335,'1.3.12.2.1107.5.2.32.35412.201009141337447209029882.0.0.0',0.00316,NULL,NULL,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (16990,335,'1.3.12.2.1107.5.2.32.35412.201009141337447209029882.0.0.0',0.00316,NULL,NULL,NULL,2,NULL,'this is a bit noisier than most t1 from UNC','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (17018,412,'1.3.12.2.1107.5.2.32.35412.2010091414140972896788338.0.0.0',0.00316,NULL,NULL,NULL,2,4,NULL,'2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (17019,412,'1.3.12.2.1107.5.2.32.35412.2010091414140972896788338.0.0.0',0.00316,NULL,NULL,NULL,2,NULL,'slightly noisy','2019-05-28 10:19:58');
INSERT INTO `feedback_mri_comments` (`CommentID`, `FileID`, `SeriesUID`, `EchoTime`, `PhaseEncodingDirection`, `EchoNumber`, `SessionID`, `CommentTypeID`, `PredefinedCommentID`, `Comment`, `ChangeTime`) VALUES (17020,412,'1.3.12.2.1107.5.2.32.35412.2010091414140972896788338.0.0.0',0.00316,NULL,NULL,NULL,6,NULL,'Candidate moved during scan','2019-05-28 10:19:58');
UNLOCK TABLES;
SET FOREIGN_KEY_CHECKS=1;
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