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Python-numpy interface plugin for Gatan Digital Micrograph/Microscopy Suite 2+. Allows acquisition of images and fast transfer into numpy arrays.

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pyDM

Python - Gatan Microscopy Suite interface

For Digital Micrograph 2.0+ (there is a version for 1.7 as well, ask if interested)

Author: Robert A. McLeod Email: [email protected]

Requires Microsoft Visual Studio 2005 and the Gatan API ver. 2. Builds a plugin that must be placed into the Gatan Digital Micrograph plugins folder, and a .pyd file which may be loaded as a Python module. Data is transferred between the two softwares by a shared mapped memory region. For many image dimensions this plugin is faster than acquisition within Digital Micrograph with the proprietary .s scripting interface.

Compiled copies of the DLLs are found in Win32/Release.

Installation (by hand):

pyDMPipeline.dll -> \ProgramData\Gatan\Plugins boost_python-vc90-mt-1_52.dll -> pyDM.pyb ->

See the pyDMPipeline.pdf for detailed notes.

Sample vcproj files are provided for Visual Studio 2008 (which is required). Also a relatively older version of Boost is required. See the build notes for details.

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Python-numpy interface plugin for Gatan Digital Micrograph/Microscopy Suite 2+. Allows acquisition of images and fast transfer into numpy arrays.

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