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Update README.Rmd

Update README.Rmd #73

on:
push:
branches:
- master
pull_request:
branches:
- master
name: test-coverage
jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-r@v2
- uses: r-lib/actions/setup-pandoc@v2
- name: Install system dependencies
run: |
sudo apt-get update
sudo apt-get install -y libcurl4-openssl-dev libssl-dev
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
uses: actions/cache@v3
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-R-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-R-${{ hashFiles('.github/R-version') }}-1-
- name: Install dependencies
run: |
install.packages(c("remotes", "covr"))
remotes::install_deps(dependencies = TRUE)
shell: Rscript {0}
- name: Check for missing packages
run: |
missing_pkgs <- setdiff(c("covr", "testthat"), rownames(installed.packages()))
if (length(missing_pkgs) > 0) {
cat("Missing packages:", paste(missing_pkgs, collapse = ", "), "\n")
install.packages(missing_pkgs)
} else {
cat("All required packages are installed.\n")
}
shell: Rscript {0}
- name: Run tests
run: |
testthat::test_local()
shell: Rscript {0}
- name: Test coverage
run: covr::codecov()
shell: Rscript {0}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}