working out how to get conda initialised

rosalindfranklininstitute · Oct 19, 2021 · 6c2fabd · 6c2fabd
1 parent e87c9cb
commit 6c2fabd
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diff --git a/.github/workflows/ci-conda.yml b/.github/workflows/ci-conda.yml
@@ -6,6 +6,9 @@ on:
 jobs:
   build-conda-installer:
     runs-on: ubuntu-20.04
+    defaults:
+      run:
+        shell: bash -l {0}
     steps:
       - uses: actions/checkout@v2
       - uses: conda-incubator/setup-miniconda@v2
@@ -23,8 +26,8 @@ jobs:
           conda init bash
       - name: Build Installer
         run: |
-          conda install constructor
-          conda activate
+          conda create -n constructor -c defaults constructor
+          conda activate constructor
           conda info
           conda list
           constructor .

diff --git a/construct.yaml b/construct.yaml
@@ -5,6 +5,6 @@ channels:
   - https://conda.anaconda.org/conda-forge
   - file:///usr/share/miniconda3/conda-bld/
 specs:
-  - python 3.8.*
+  - python 3.9.*
   - Ot2Rec 0.1.0
   - conda