Prepare github actions for test and docs

.github/workflows/unit-tests.yml

@@ -23,11 +23,10 @@ jobs:
       uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
-    - name: Install dependencies
+    - name: Install Dependencies
       run: |
-        python -m pip install --upgrade pip
-        python -m pip install flake8 pytest
-        python -m pip install cvxpy scipy picos pyscipopt
+        pip install poetry
+        poetry install
     - name: Lint with flake8
       run: |
         # stop the build if there are Python syntax errors or undefined names

pyproject.toml

@@ -1,8 +1,8 @@
 [tool.poetry]
 name = "corneto"
 version = "1.0.0-alpha.0"
-description = "CORNETO: A Unified Omics-Driven Framework for Network Inference"
-authors = ["Pablo Rordriguez-Mier <[email protected]>"]
+description = "CORNETO: A Unified Framework for Omics-Driven Network Inference"
+authors = ["Pablo Rodriguez-Mier <[email protected]>"]
 classifiers = [
     "Development Status :: 3 - Alpha",
     "Intended Audience :: Developers",
@@ -66,6 +66,7 @@ myst-nb = "^0.17.2"
 sphinx-autodoc-typehints = "^1.21.8"
 sphinx-hoverxref = "^1.3.0"
 pytest = "^8.1.1"
+flake8 = "^7.0.0"
 
 
 [tool.poetry.extras]