Version 0.11.0

Store whether or not variants are on opposite strands (new Variant bool attribute reverse)

Expose diagfactor and maxgap options

v0.10.3

Update setup.py

Version 0.10.2

Bug fix in alignment.qry_coords_from_ref_coord(), alignment.ref_coords_from_qry_coord(). Only use indel positions that intersect the alignment (ie both the alignment ref and qry coords must intersect the indel position).

Version 0.10.1

Bug fix from release 0.10.0, parsing show-snps output when -C option is not used.

Version 0.10.0

Expose -C option to show-snps

Version 0.9.0

Expose the option -c/mincluster to nucmer and promer.

Version 0.8.1

Remove a debugging print statement from previous release

Version 0.8.0

Added method to get reference coordinate corresponding to query coordinate from a numcer alignment (ref_coords_from_qry_coord)

Version 0.7.1

Make pymummer.__version__ work

Version 0.7.0

Added method to get query coordinate corresponding to ref coordinate from a numcer alignment (qry_coords_from_ref_coord)