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fixed ci
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yumisims committed Oct 11, 2023
1 parent 91ddd8e commit 5d87195
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions .github/workflows/ci.yml
Original file line number Diff line number Diff line change
Expand Up @@ -68,12 +68,12 @@ jobs:
run: |
mkdir NT_database
curl -L https://ftp.ncbi.nlm.nih.gov/blast/db/18S_fungal_sequences.tar.gz | tar -C NT_database -xzf -
- name: Download the subset of Diamond database
run: |
mkdir diamond
wget -c https://tolit.cog.sanger.ac.uk/test-data/resources/diamond/UP000000212_1234679_tax.dmnd -O diamond/UP000000212_1234679_tax.dmnd
wget -c https://tolit.cog.sanger.ac.uk/test-data/resources/diamond/UP000000212_1234679_tax.dmnd -O diamond/UP000000212_1234679_tax.dmnd
- name: Run pipeline with test data
- name: Run pipeline with test data
# TODO nf-core: You can customise CI pipeline run tests as required
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