Changing paths

sanger-tol · Feb 5, 2025 · 72307b0 · 72307b0
1 parent a099eb8
commit 72307b0
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Showing 2 changed files with 3 additions and 6 deletions.
diff --git a/assets/samplesheet.csv b/assets/samplesheet.csv
diff --git a/tests/main.nf.test b/tests/main.nf.test
@@ -10,9 +10,9 @@ nextflow_pipeline {
 
         when {
             params {
-                input = "./TreeValTinyData/assembly/draft/grTriPseu1.fa"
-                cram = "./TreeValTinyData/genomic_data/hic-arima/"
-                longread = "./TreeValTinyData/genomic_data/pacbio/"
+                input = "/home/runner/work/curationpretext/curationpretext/TreeValTinyData/assembly/draft/grTriPseu1.fa"
+                cram = "/home/runner/work/curationpretext/curationpretext/TreeValTinyData/genomic_data/hic-arima/"
+                longread = "/home/runner/work/curationpretext/curationpretext/TreeValTinyData/genomic_data/pacbio/"
                 longread_type = "hifi"
                 sample = "CurationPretextTest"
                 teloseq = "TTAGGG"