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Update pipeline template
maintain
Tasks to keep pipelines up to date
#168
opened Feb 26, 2025 by
muffato
Include alternate haplotypes
enhancement
Improvement of the existing features
#159
opened Dec 10, 2024 by
tkchafin
Allow inclusion of multiple species in a single genome note
enhancement
Improvement of the existing features
question
Further information is requested
#148
opened Oct 14, 2024 by
BethYates
MUMmer
feature
Requests for new features
good first issue
Good for newcomers
help wanted
Open to anyone interested
#124
opened Jun 20, 2024 by
BethYates
GenomeScope
feature
Requests for new features
good first issue
Good for newcomers
help wanted
Open to anyone interested
#123
opened Jun 20, 2024 by
BethYates
Flagger
feature
Requests for new features
good first issue
Good for newcomers
help wanted
Open to anyone interested
#122
opened Jun 20, 2024 by
BethYates
Make BUSCO annotations an optional input
enhancement
Improvement of the existing features
question
Further information is requested
#120
opened Jun 17, 2024 by
muffato
Merqury and Meryl
feature
Requests for new features
good first issue
Good for newcomers
help wanted
Open to anyone interested
#117
opened Jun 13, 2024 by
BethYates
Add GFA stats
feature
Requests for new features
good first issue
Good for newcomers
help wanted
Open to anyone interested
#116
opened Jun 13, 2024 by
BethYates
Agree on which Busco lineage to use for which species
maintain
Tasks to keep pipelines up to date
question
Further information is requested
#100
opened Dec 8, 2023 by
muffato
Optional readmapping subworkflow
feature
Requests for new features
#72
opened Jun 27, 2023 by
priyanka-surana
Sex chromosomes
feature
Requests for new features
question
Further information is requested
#24
opened May 2, 2022 by
priyanka-surana
ProTip!
Follow long discussions with comments:>50.