Non-default Docker registry for bitnami/kubectl:1.2.7

[gq1]

Description of the bug

The default Docker Registry is defined as quay.io:

genomenote/nextflow.config

Line 137 in 26392b0

docker.registry = 'quay.io'

But for bitnami/kubectl:1.2.7 is from Docker Hub, so we should use the full path in this module:

genomenote/modules/local/upload_higlass_data.nf

Line 5 in 26392b0

container "bitnami/kubectl:1.27"

Otherwise, we can see error like this:

ERROR    Pulling of "bitnami/kubectl:1.27" failed.
Please troubleshoot the command  "singularity pull --name nextflow/cache/nxf_singularity/bitnami-kubectl-1.27.img docker://quay.io,docker.io/bitnami/kubectl:1.27" manually.

You can use -l docker.io for nf-core download to overcome this problem.

[muffato]

Does it work if genomenote/modules/local/upload_higlass_data.nf is changed to docker.io/bitnami/kubectl:1.27 ?