Merge pull request #302 from sanger/301-add-a-new-sequence-and-prefix…

…-for-pam 301 add a new sequence and prefix for pam
sanger · Oct 24, 2022 · 7de828d · 7de828d
2 parents 8e33783 + b8cef4e
commit 7de828d
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diff --git a/baracoda/config/defaults.py b/baracoda/config/defaults.py
@@ -325,6 +325,12 @@
         "formatter_class": GenericBarcodeFormatter,
         "enableChildrenCreation": False,
     },
+    {
+        "prefix": "PAM",
+        "sequence_name": "pam",
+        "formatter_class": GenericBarcodeFormatter,
+        "enableChildrenCreation": False,
+    },
     {
         "prefix": "HT",
         "sequence_name": "ht",

diff --git a/baracoda/sql/schema.sql b/baracoda/sql/schema.sql
@@ -14,6 +14,10 @@ DROP SEQUENCE IF EXISTS csm;
 CREATE SEQUENCE csm
     START 111111;
 
+DROP SEQUENCE IF EXISTS pam;
+CREATE SEQUENCE pam
+    START 111111;
+
 DROP TABLE IF EXISTS barcodes;
 CREATE TABLE barcodes
 (

diff --git a/baracoda/static/index.html b/baracoda/static/index.html
@@ -93,6 +93,7 @@
         { "prefix": "WAHH", "sequence_name": "heron" },
         { "prefix": "WSFT", "sequence_name": "heron" },
         { "prefix": "COS", "sequence_name": "csm"},
+        { "prefix": "PAM", "sequence_name": "pam"},
         { "prefix": "HT", "sequence_name": "ht" }
     ]
 

diff --git a/migrations/versions/db39b037a71d_add_pam_sequence.py b/migrations/versions/db39b037a71d_add_pam_sequence.py
@@ -0,0 +1,23 @@
+"""add_pam_sequence
+
+Revision ID: db39b037a71d
+Revises: bcd74f0a02ea
+Create Date: 2022-10-21 14:45:22.805527
+
+"""
+from alembic import op
+
+
+# revision identifiers, used by Alembic.
+revision = "db39b037a71d"
+down_revision = "bcd74f0a02ea"
+branch_labels = None
+depends_on = None
+
+
+def upgrade():
+    op.execute("CREATE SEQUENCE pam START 111111;")
+
+
+def downgrade():
+    op.execute("DROP SEQUENCE IF EXISTS pam;")