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GPL 963 LCMB pipeline #1337

Merged
merged 18 commits into from
Jul 27, 2023
Merged

GPL 963 LCMB pipeline #1337

merged 18 commits into from
Jul 27, 2023

Commits on Jul 14, 2023

  1. updated lcmb tour doc

    @andrewsparkes
    andrewsparkes committed Jul 14, 2023
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  2. removed lcmb request type from wgs pipeline

    @andrewsparkes
    andrewsparkes committed Jul 14, 2023
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  3. initial versions of lcmb pipeline and purpose config files

    @andrewsparkes
    andrewsparkes committed Jul 14, 2023
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Commits on Jul 17, 2023

  1. Removed separate mx section, not needed

    @andrewsparkes
    andrewsparkes committed Jul 17, 2023
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  2. added file link, will need updating later

    @andrewsparkes
    andrewsparkes committed Jul 17, 2023
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  3. updated docs for lcmb purposes

    @andrewsparkes
    andrewsparkes committed Jul 17, 2023
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Commits on Jul 18, 2023

  1. added LCMB bed verifications

    @andrewsparkes
    andrewsparkes committed Jul 18, 2023
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  2. added bundle exec to rubocop commands

    @andrewsparkes
    andrewsparkes committed Jul 18, 2023
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  3. modified end prep bed verification to set started state

    @andrewsparkes
    andrewsparkes committed Jul 18, 2023
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Commits on Jul 20, 2023

  1. Merge pull request #1338 from sanger/dpl-824-add-lcmb-bed-verifications 

    Dpl 824 add lcmb bed verifications
    @andrewsparkes
    andrewsparkes authored Jul 20, 2023
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Commits on Jul 21, 2023

  1. Added custom pooling csv file for LCMB, tests

    @andrewsparkes
    andrewsparkes committed Jul 21, 2023
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Commits on Jul 24, 2023

  1. fixed includes format

    @andrewsparkes
    andrewsparkes committed Jul 24, 2023
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Commits on Jul 26, 2023

  1. added comment, removed unneeded qc on ancestor

    @andrewsparkes
    andrewsparkes committed Jul 26, 2023
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  2. removed unneeded ancestor well assigment

    @andrewsparkes
    andrewsparkes committed Jul 26, 2023
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  3. changed to selenium-webdriver to fix CI issues

    @andrewsparkes
    andrewsparkes committed Jul 26, 2023
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  4. reverted webdriver change

    @andrewsparkes
    andrewsparkes committed Jul 26, 2023
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  5. merged in develop

    @andrewsparkes
    andrewsparkes committed Jul 26, 2023
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  6. Merge pull request #1346 from sanger/dpl-825-lcmb-concentrations-csv-… 

    …file

Added custom pooling csv file for LCMB, tests
    @andrewsparkes
    andrewsparkes authored Jul 26, 2023
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