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Prepare release of version 1.0.0 #64

Merged
merged 51 commits into from
Feb 15, 2024
Merged

Prepare release of version 1.0.0 #64

merged 51 commits into from
Feb 15, 2024

Commits on Jan 3, 2024

  1. bump tj-actions/changed-files from 23 to 41 in /.github/workflows 

    Bumps tj-actions/changed-files from 23 to 41.
    @yoldas
    yoldas authored Jan 3, 2024
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Commits on Jan 16, 2024

  1. Bump requests from 2.28.2 to 2.31.0 

    Bumps [requests](https://github.com/psf/requests) from 2.28.2 to 2.31.0.
- [Release notes](https://github.com/psf/requests/releases)
- [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md)
- [Commits](psf/requests@v2.28.2...v2.31.0)

---
updated-dependencies:
- dependency-name: requests
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <[email protected]>
    @dependabot
    dependabot[bot] authored Jan 16, 2024
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  2. Updated readme to include snappy fix.

    @stevieing
    stevieing committed Jan 16, 2024
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  3. Merge pull request #51 from sanger/update-readme-to-include-snappy-fix 

    Updated readme to include snappy fix.
    @stevieing
    stevieing authored Jan 16, 2024
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  4. Merge pull request #50 from sanger/dependabot/pip/requests-2.31.0 

    Bump requests from 2.28.2 to 2.31.0
    @stevieing
    stevieing authored Jan 16, 2024
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  5. Bump certifi from 2022.12.7 to 2023.7.22 

    Bumps [certifi](https://github.com/certifi/python-certifi) from 2022.12.7 to 2023.7.22.
- [Commits](certifi/python-certifi@2022.12.07...2023.07.22)

---
updated-dependencies:
- dependency-name: certifi
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <[email protected]>
    @dependabot
    dependabot[bot] authored Jan 16, 2024
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  6. Bump urllib3 from 1.26.14 to 1.26.18 

    Bumps [urllib3](https://github.com/urllib3/urllib3) from 1.26.14 to 1.26.18.
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](urllib3/urllib3@1.26.14...1.26.18)

---
updated-dependencies:
- dependency-name: urllib3
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <[email protected]>
    @dependabot
    dependabot[bot] authored Jan 16, 2024
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  7. Bump aiohttp from 3.8.3 to 3.9.0 

    Bumps [aiohttp](https://github.com/aio-libs/aiohttp) from 3.8.3 to 3.9.0.
- [Release notes](https://github.com/aio-libs/aiohttp/releases)
- [Changelog](https://github.com/aio-libs/aiohttp/blob/master/CHANGES.rst)
- [Commits](aio-libs/aiohttp@v3.8.3...v3.9.0)

---
updated-dependencies:
- dependency-name: aiohttp
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <[email protected]>
    @dependabot
    dependabot[bot] authored Jan 16, 2024
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  8. Merge pull request #52 from sanger/dependabot/pip/certifi-2023.7.22 

    Bump certifi from 2022.12.7 to 2023.7.22
    @stevieing
    stevieing authored Jan 16, 2024
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  9. Merge pull request #53 from sanger/dependabot/pip/urllib3-1.26.18 

    Bump urllib3 from 1.26.14 to 1.26.18
    @stevieing
    stevieing authored Jan 16, 2024
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  10. Merge pull request #54 from sanger/dependabot/pip/aiohttp-3.9.0 

    Bump aiohttp from 3.8.3 to 3.9.0
    @stevieing
    stevieing authored Jan 16, 2024
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Commits on Jan 30, 2024

  1. Bump aiohttp from 3.9.0 to 3.9.2 

    Bumps [aiohttp](https://github.com/aio-libs/aiohttp) from 3.9.0 to 3.9.2.
- [Release notes](https://github.com/aio-libs/aiohttp/releases)
- [Changelog](https://github.com/aio-libs/aiohttp/blob/master/CHANGES.rst)
- [Commits](aio-libs/aiohttp@v3.9.0...v3.9.2)

---
updated-dependencies:
- dependency-name: aiohttp
  dependency-type: indirect
...

Signed-off-by: dependabot[bot] <[email protected]>
    @dependabot
    dependabot[bot] authored Jan 30, 2024
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Commits on Feb 5, 2024

  1. Update instructions around snappy installation

    Stuart McHattie committed Feb 5, 2024
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  2. Fix Markdown formatting

    Stuart McHattie committed Feb 5, 2024
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  3. Improve documentation markdown files

    Stuart McHattie committed Feb 5, 2024
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Commits on Feb 6, 2024

  1. Merge pull request #56 from sanger/dependabot/pip/aiohttp-3.9.2 

    Bump aiohttp from 3.9.0 to 3.9.2
    @stevieing
    stevieing authored Feb 6, 2024
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  2. Fix typo in docstring 

    Also lay the docstring out according to Google's style guide
    @sdjmchattie
    sdjmchattie committed Feb 6, 2024
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  3. Switch Traction payload to receive Sanger Sample ID

    @sdjmchattie
    sdjmchattie committed Feb 6, 2024
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  4. Accept black reformat

    @sdjmchattie
    sdjmchattie committed Feb 6, 2024
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Commits on Feb 7, 2024

  1. Merge pull request #58 from sanger/dpl-1055-sample-names-in-qc-results 

    DPL-1055: Sample names in QC results
    @sdjmchattie
    sdjmchattie authored Feb 7, 2024
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Commits on Feb 9, 2024

  1. Do some tidy up of docstrings

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  2. Change requests to a list 

    It doesn't make sense for it to be a dictionary when we iterate over it by expecting all keys in a range the same size as the length of the entries in the dictionary!
    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  3. Remove interfaces around MessageProperty 

    This also includes those for OutputTractionMessageInterface and TractionQcMessageInterface
    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  4. Remove remaining unneeded interfaces

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  5. Remove unnecessary property boilerplate on MessageProperty

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  6. Remove boilerplate for instance variables in all message types

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  7. Change Dict and List imports to built in types

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  8. Remove remaining Optionals

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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  9. Remove Unions

    @sdjmchattie
    sdjmchattie committed Feb 9, 2024
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Commits on Feb 12, 2024

  1. Change TractionQcMessage requests to a list 

    Code elsewhere assumes the indices are non-sparse so we should be using a list
    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  2. Simplify shortened line layout

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  3. Tidy up docstrings for message types

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  4. Undo accidental lowercasing of DictInput class

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  5. Update expected payload in unit tests for V2 Traction API

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  6. Update the serializer for tube requests

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  7. Implement plates_attributes for Traction message

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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  8. Fix linting issues

    @sdjmchattie
    sdjmchattie committed Feb 12, 2024
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Commits on Feb 13, 2024

  1. Merge pull request #59 from sanger/dpl-952-pre-issue-refactor 

    DPL-952: Refactor the code before applying the update for Traction V2
    @sdjmchattie
    sdjmchattie authored Feb 13, 2024
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  2. Merge branch 'develop' into dpl-952-support-traction-v2-api

    @sdjmchattie
    sdjmchattie committed Feb 13, 2024
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  3. Update README.md

    @stevieing
    stevieing authored Feb 13, 2024
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  4. Add a test for multiple plates appearing in the same message

    @sdjmchattie
    sdjmchattie committed Feb 13, 2024
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  5. Add test for a mix of plates and tubes in traction messages

    @sdjmchattie
    sdjmchattie committed Feb 13, 2024
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  6. Fix some documentation inaccuracies

    @sdjmchattie
    sdjmchattie committed Feb 13, 2024
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  7. Remove unneeded repetition for request_payload

    @sdjmchattie
    sdjmchattie committed Feb 13, 2024
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  8. Merge pull request #60 from sanger/dpl-952-support-traction-v2-api 

    DPL-952: Support traction V2 API
    @sdjmchattie
    sdjmchattie authored Feb 13, 2024
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Commits on Feb 14, 2024

  1. Remove unneeded blank lines in code block

    @sdjmchattie
    sdjmchattie committed Feb 14, 2024
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  2. Update release version to 0.4.0

    @sdjmchattie
    sdjmchattie committed Feb 14, 2024
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Commits on Feb 15, 2024

  1. Set version to 1.0.0

    @sdjmchattie
    sdjmchattie committed Feb 15, 2024
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  2. Simplify location creation code 

    Remove the padding method and turn the location creation into a list comprehension
    @sdjmchattie
    sdjmchattie committed Feb 15, 2024
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  3. Use datetime.utcnow() in tests 

    Not strictly necessary, but it's better practice than the locale affected now() method
    @sdjmchattie
    sdjmchattie committed Feb 15, 2024
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  4. Merge pull request #65 from sanger/dpl-952-remaining-fixes 

    DPL-952: Remaining Fixes
    @sdjmchattie
    sdjmchattie authored Feb 15, 2024
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