scipy-conference · JustGag · May 1, 2024 · May 3, 2024 · May 3, 2024 · May 22, 2024
diff --git a/myst.yml b/myst.yml
@@ -0,0 +1,21 @@
+# See docs at: https://mystmd.org/guide/frontmatter
+version: 1
+project:
+  id: 9ec8e89f-ba6d-471e-a169-ca19a0680df2
+  # title:
+  # description:
+  keywords: []
+  authors: []
+  github: https://github.com/tahiri-lab/scipy_proceedings_2024
+  # bibliography: []
+site:
+  template: book-theme
+  # title:
+  # options:
+  #   favicon: favicon.ico
+  #   logo: site_logo.png
+  nav: []
+  actions:
+    - title: Learn More
+      url: https://mystmd.org/guide
+  domains: []
diff --git a/papers/Gagnon_Keke_Tahiri_2024/banner.png b/papers/Gagnon_Keke_Tahiri_2024/banner.png
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure1.png b/papers/Gagnon_Keke_Tahiri_2024/figure1.png
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure2.png b/papers/Gagnon_Keke_Tahiri_2024/figure2.png
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure3.avif b/papers/Gagnon_Keke_Tahiri_2024/figure3.avif
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure4.png b/papers/Gagnon_Keke_Tahiri_2024/figure4.png
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure5.webp b/papers/Gagnon_Keke_Tahiri_2024/figure5.webp
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure6.png b/papers/Gagnon_Keke_Tahiri_2024/figure6.png
diff --git a/papers/Gagnon_Keke_Tahiri_2024/figure7.webp b/papers/Gagnon_Keke_Tahiri_2024/figure7.webp
diff --git a/papers/Gagnon_Keke_Tahiri_2024/main.tex b/papers/Gagnon_Keke_Tahiri_2024/main.tex
diff --git a/papers/Gagnon_Keke_Tahiri_2024/mybib.bib b/papers/Gagnon_Keke_Tahiri_2024/mybib.bib
diff --git a/papers/Gagnon_Keke_Tahiri_2024/myst.yml b/papers/Gagnon_Keke_Tahiri_2024/myst.yml
@@ -0,0 +1,54 @@
+version: 1
+project:
+  # Update this to match `scipy-2024-<folder>` the folder should be `<firstname_surname>`
+  id: scipy-2024-00_tex_template
-  id: scipy-2024-00_tex_template
+  id: scipy-2024-gagnon_keke_tahiri
-  id: scipy-2024-00_tex_template
+  id: scipy-2024-gagnon_keke_tahiri
+  title: Phylogeographic analysis of the impact of climatic and geographical parameters on the genetic structuring of cumacea in the northern waters of the north atlantic
+  subtitle: LaTeX edition
+  # Authors should have affiliations, emails and ORCIDs if available
+  authors:
+    - name: Justin Gagnon
+      email: [email protected]
+      affiliations:
+        - Department of Computer Science, University of Sherbrooke, 2500, boul. de l'Université, Sherbrooke, Quebec, J1K 2R1 Canada
+    - name: Mansour Kebe
+      email: [email protected]
+      affiliations:
+        - Department of Computer Science, University of Sherbrooke, 2500, boul. de l'Université, Sherbrooke, Quebec, J1K 2R1 Canada
+    - name: Nadia Tahiri
+      email: [email protected]
+      orcid: 0000-0002-1818-208X
+      affiliations:
+        - Department of Computer Science, University of Sherbrooke, 2500, boul. de l'Université, Sherbrooke, Quebec, J1K 2R1 Canada
+      corresponding: true
+  keywords:
+    - Atlantic
+    - Arctic
+    - Bioinformatics
+    - Biology
+    - Cumacea
+    - Iceland
+    - Phylogeny
+    - Phylogeography
+  # Add the abbreviations that you use in your paper here
+  abbreviations:
+    MyST: Markedly Structured Text
+  # It is possible to explicitly ignore the `doi-exists` check for certain citation keys
+  error_rules:
+    - rule: doi-exists
+      severity: ignore
+      keys:
+        - Atr03
+        - terradesert
+        - jupyter
+        - sklearn1
+        - sklearn2
+  # A banner will be generated for you on publication, this is a placeholder
+  banner: banner.png
+  # The rest of the information shouldn't be modified
+  subject: Research Article
+  open_access: true
+  license: CC-BY-4.0
+  venue: Scipy 2024
+  date: 2024-07-10
+site:
+  template: article-theme
diff --git a/presentations/lightning/example/.JOSE-lightning-talk.pdf.icloud b/presentations/lightning/example/.JOSE-lightning-talk.pdf.icloud
diff --git a/presentations/lightning/example/JOSE-lightning-talk.pdf b/presentations/lightning/example/JOSE-lightning-talk.pdf