fixed requirements to match what's used (#185)

CHANGELOG.md

@@ -10,7 +10,7 @@ and this project adheres to [Semantic Versioning][].
 
 ## [0.3.1] - TBD
 
-## [0.3.0] - TBD
+## [0.3.0] - 2023-11-09
 
 ### Added
 
@@ -23,6 +23,7 @@ and this project adheres to [Semantic Versioning][].
 - Enabled saving annotations #168
 - Added safeguard when table is None #177 @aeisenbarth
 - Fix plotting annotations when changing element #175
+- Fixed installation requirements #185 @goanpeca
 
 ## [0.2.8] - 2023-10-30
 

setup.cfg

@@ -33,31 +33,42 @@ python_requires = >=3.9
 setup_requires = setuptools_scm
 # add your package requirements here
 install_requires =
-    numpy
-    magicgui
-    qtpy
-    numba
     anndata
-    scikit-image
-    napari
+    click
+    cycler
+    dask
+    geopandas
     loguru
-    typing_extensions>=4.8.0
+    matplotlib
+    napari
     napari-matplotlib
+    napari-plugin-engine
+    numba
+    numpy
+    packaging
+    pandas
+    pillow
+    qtpy
+    scipy
+    shapely
     scikit-learn
     spatialdata>=0.0.15
+    superqt
+    typing_extensions>=4.8.0
+    vispy
+    xarray
 
 package_dir =
     =src
 
 
 [options.extras_require]
 test =
-    tox
-    pytest  # https://docs.pytest.org/en/latest/contents.html
+    loguru
+    pytest
     pytest-cov  # https://pytest-cov.readthedocs.io/en/latest/
     pytest-qt  # https://pytest-qt.readthedocs.io/en/latest/
     pre-commit>=2.9.0
-    towncrier>=21.3.0
 
 doc =
     sphinx>=4.5
@@ -73,6 +84,9 @@ doc =
     sphinx-copybutton
     sphinx-qt-documentation
     myst-nb
+    # used in the notebooks
+    squidpy
+    scanpy
 
 readthedocs =
 	pydantic<2