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Use dev version of bio2zarr for testing NumPy 2
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tomwhite committed Oct 10, 2024

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3 changes: 2 additions & 1 deletion .github/workflows/build-numpy-2.yml
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@@ -23,7 +23,8 @@ jobs:
run: |
python -m pip install --upgrade pip
pip install -r requirements.txt -r requirements-dev.txt
pip install -U 'numpy<2.1'
# update bio2zarr for NumPy 2, see https://github.com/sgkit-dev/bio2zarr/issues/256
pip install -U 'numpy<2.1' -U git+https://github.com/sgkit-dev/bio2zarr.git
- name: Run pre-commit
uses: pre-commit/[email protected]
- name: Test with pytest (numba jit disabled)

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