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Fix typos
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fgvieira authored Sep 30, 2024
1 parent 15771b9 commit 5bc04e3
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions bio/seqkit/wrapper.py
Original file line number Diff line number Diff line change
Expand Up @@ -38,9 +38,9 @@


if snakemake.params.get("out_bgzip"):
input = input + " | bgzip --threads {snakemake.threads} > {snakemake.output[0]}"
input = input + f" | bgzip --threads {snakemake.threads} > {snakemake.output[0]}"
else:
input = "--out-file {snakemake.output[0]} " + input
input = f"--out-file {snakemake.output[0]} " + input

shell(
"(seqkit {snakemake.params.command}"
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