-
Notifications
You must be signed in to change notification settings - Fork 1
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
✅ test: Add a test case to ensure that we can join multiple FHIR Reso…
…urces and write the result into a CSV file
- Loading branch information
Showing
4 changed files
with
514 additions
and
13 deletions.
There are no files selected for viewing
356 changes: 356 additions & 0 deletions
356
tofhir-engine/src/test/resources/fhir-resources/encounter-summary-mapping-resource.json
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,356 @@ | ||
| [ | ||
| { | ||
| "resourceType": "Patient", | ||
| "id": "example", | ||
| "text": { | ||
| "status": "generated", | ||
| "div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">Peter James Chalmers</div>" | ||
| }, | ||
| "identifier": [ | ||
| { | ||
| "use": "usual", | ||
| "type": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/v2-0203", | ||
| "code": "MR", | ||
| "display": "Medical Record Number" | ||
| } | ||
| ] | ||
| }, | ||
| "system": "http://hospital.smarthealthit.org", | ||
| "value": "12345" | ||
| } | ||
| ], | ||
| "active": true, | ||
| "name": [ | ||
| { | ||
| "use": "official", | ||
| "family": "Chalmers", | ||
| "given": [ | ||
| "Peter", | ||
| "James" | ||
| ] | ||
| }, | ||
| { | ||
| "use": "usual", | ||
| "given": [ | ||
| "Jim" | ||
| ] | ||
| } | ||
| ], | ||
| "telecom": [ | ||
| { | ||
| "system": "phone", | ||
| "value": "(03) 5555 6473", | ||
| "use": "work" | ||
| } | ||
| ], | ||
| "gender": "male", | ||
| "birthDate": "1974-12-25", | ||
| "deceasedBoolean": false, | ||
| "address": [ | ||
| { | ||
| "use": "home", | ||
| "type": "both", | ||
| "line": [ | ||
| "534 Erewhon St" | ||
| ], | ||
| "city": "PleasantVille", | ||
| "district": "Rainbow", | ||
| "state": "Vic", | ||
| "postalCode": "3999", | ||
| "country": "Australia" | ||
| } | ||
| ], | ||
| "contact": [ | ||
| { | ||
| "relationship": [ | ||
| { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/v2-0131", | ||
| "code": "N", | ||
| "display": "Next of Kin" | ||
| } | ||
| ] | ||
| } | ||
| ], | ||
| "name": { | ||
| "family": "du Marché", | ||
| "given": [ | ||
| "Bénédicte" | ||
| ] | ||
| }, | ||
| "telecom": [ | ||
| { | ||
| "system": "phone", | ||
| "value": "+33 (237) 998327" | ||
| } | ||
| ], | ||
| "address": { | ||
| "use": "home", | ||
| "type": "both", | ||
| "line": [ | ||
| "534 Erewhon St" | ||
| ], | ||
| "city": "PleasantVille", | ||
| "district": "Rainbow", | ||
| "state": "Vic", | ||
| "postalCode": "3999", | ||
| "country": "Australia" | ||
| }, | ||
| "gender": "female", | ||
| "period": { | ||
| "start": "2012-01-01" | ||
| } | ||
| } | ||
| ], | ||
| "managingOrganization": { | ||
| "reference": "Organization/1", | ||
| "display": "Example Organization" | ||
| } | ||
| }, | ||
| { | ||
| "resourceType": "Encounter", | ||
| "id": "example-encounter", | ||
| "status": "completed", | ||
| "class": [ | ||
| { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/v3-ActCode", | ||
| "code": "AMB", | ||
| "display": "ambulatory" | ||
| } | ||
| ] | ||
| } | ||
| ], | ||
| "subject": { | ||
| "reference": "Patient/example", | ||
| "display": "Peter James Chalmers" | ||
| }, | ||
| "plannedStartDate": "2024-07-22T08:00:00Z", | ||
| "plannedEndDate": "2024-07-22T09:00:00Z", | ||
| "serviceProvider": { | ||
| "reference": "Organization/example-org", | ||
| "display": "Example Organization" | ||
| } | ||
| }, | ||
| { | ||
| "resourceType": "Observation", | ||
| "id": "example-observation", | ||
| "meta": { | ||
| "profile": [ | ||
| "http://onfhir.io/fhir/StructureDefinition/MyObservation" | ||
| ] | ||
| }, | ||
| "status": "final", | ||
| "basedOn": [ | ||
| { | ||
| "reference": "ServiceRequest/1" | ||
| } | ||
| ], | ||
| "category": [ | ||
| { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/observation-category", | ||
| "code": "laboratory", | ||
| "display": "Laboratory" | ||
| } | ||
| ], | ||
| "text": "Laboratory" | ||
| } | ||
| ], | ||
| "code": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://loinc.org", | ||
| "code": "2093-3", | ||
| "display": "Body temperature" | ||
| } | ||
| ], | ||
| "text": "Body temperature" | ||
| }, | ||
| "subject": { | ||
| "reference": "Patient/example", | ||
| "display": "Peter James Chalmers" | ||
| }, | ||
| "encounter": { | ||
| "reference": "Encounter/example-encounter", | ||
| "display": "Ambulatory Encounter" | ||
| }, | ||
| "effectiveDateTime": "2024-07-22T09:00:00Z", | ||
| "valueQuantity": { | ||
| "value": 37.5, | ||
| "unit": "Celsius", | ||
| "system": "http://unitsofmeasure.org", | ||
| "code": "Cel" | ||
| } | ||
| }, | ||
| { | ||
| "resourceType": "Condition", | ||
| "id": "example-condition", | ||
| "clinicalStatus": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/condition-clinical", | ||
| "code": "active", | ||
| "display": "Active" | ||
| } | ||
| ], | ||
| "text": "Active" | ||
| }, | ||
| "verificationStatus": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/condition-ver-status", | ||
| "code": "confirmed", | ||
| "display": "Confirmed" | ||
| } | ||
| ], | ||
| "text": "Confirmed" | ||
| }, | ||
| "code": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://snomed.info/sct", | ||
| "code": "44054006", | ||
| "display": "Hypertension" | ||
| } | ||
| ], | ||
| "text": "Hypertension" | ||
| }, | ||
| "subject": { | ||
| "reference": "Patient/example", | ||
| "display": "Peter James Chalmers" | ||
| }, | ||
| "encounter": { | ||
| "reference": "Encounter/example-encounter", | ||
| "display": "Ambulatory Encounter" | ||
| }, | ||
| "onsetDateTime": "2024-07-22" | ||
| }, | ||
| { | ||
| "resourceType": "Encounter", | ||
| "id": "example-encounter-2", | ||
| "status": "completed", | ||
| "class": [ | ||
| { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/v3-ActCode", | ||
| "code": "EMER", | ||
| "display": "emergency" | ||
| } | ||
| ] | ||
| } | ||
| ], | ||
| "subject": { | ||
| "reference": "Patient/example", | ||
| "display": "Peter James Chalmers" | ||
| }, | ||
| "plannedStartDate": "2024-08-01T10:00:00Z", | ||
| "plannedEndDate": "2024-08-02T09:00:00Z", | ||
| "serviceProvider": { | ||
| "reference": "Organization/example-org", | ||
| "display": "Example Organization" | ||
| } | ||
| }, | ||
| { | ||
| "resourceType": "Observation", | ||
| "id": "example-observation-2", | ||
| "meta": { | ||
| "profile": [ | ||
| "http://onfhir.io/fhir/StructureDefinition/MyObservation" | ||
| ] | ||
| }, | ||
| "status": "preliminary", | ||
| "basedOn": [ | ||
| { | ||
| "reference": "ServiceRequest/2" | ||
| } | ||
| ], | ||
| "category": [ | ||
| { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/observation-category", | ||
| "code": "vital-signs", | ||
| "display": "Vital Signs" | ||
| } | ||
| ], | ||
| "text": "Vital Signs" | ||
| } | ||
| ], | ||
| "code": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://loinc.org", | ||
| "code": "85354-9", | ||
| "display": "Blood pressure panel with all children optional" | ||
| } | ||
| ], | ||
| "text": "Blood Pressure" | ||
| }, | ||
| "subject": { | ||
| "reference": "Patient/example", | ||
| "display": "Peter James Chalmers" | ||
| }, | ||
| "encounter": { | ||
| "reference": "Encounter/example-encounter-2", | ||
| "display": "Emergency Encounter" | ||
| }, | ||
| "effectiveDateTime": "2024-08-01T10:15:00Z", | ||
| "valueQuantity": { | ||
| "value": 140, | ||
| "unit": "mmHg", | ||
| "system": "http://unitsofmeasure.org", | ||
| "code": "mm[Hg]" | ||
| } | ||
| }, | ||
| { | ||
| "resourceType": "Condition", | ||
| "id": "example-condition-2", | ||
| "clinicalStatus": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/condition-clinical", | ||
| "code": "recurrence", | ||
| "display": "Recurrence" | ||
| } | ||
| ], | ||
| "text": "Recurrence" | ||
| }, | ||
| "verificationStatus": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://terminology.hl7.org/CodeSystem/condition-ver-status", | ||
| "code": "confirmed", | ||
| "display": "Confirmed" | ||
| } | ||
| ], | ||
| "text": "Confirmed" | ||
| }, | ||
| "code": { | ||
| "coding": [ | ||
| { | ||
| "system": "http://snomed.info/sct", | ||
| "code": "38341003", | ||
| "display": "Hypertensive disorder, systemic arterial" | ||
| } | ||
| ], | ||
| "text": "Hypertensive Disorder" | ||
| }, | ||
| "subject": { | ||
| "reference": "Patient/example", | ||
| "display": "Peter James Chalmers" | ||
| }, | ||
| "encounter": { | ||
| "reference": "Encounter/example-encounter-2", | ||
| "display": "Emergency Encounter" | ||
| }, | ||
| "onsetDateTime": "2024-08-01" | ||
| } | ||
| ] |
Oops, something went wrong.