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@sys-bio

UW Sauro Lab

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  1. tellurium tellurium Public

    Python Environment for Modeling and Simulating Biological Systems

    Python 110 37

  2. roadrunner roadrunner Public

    Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    C++ 43 25

Repositories

Showing 10 of 107 repositories
  • roadrunner Public Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    sys-bio/roadrunner’s past year of commit activity
    C++ 43 33 77 (1 issue needs help) 4 Updated Feb 1, 2025
  • BiomodelsCache Public

    A biomodels cache for faster lookup.

    sys-bio/BiomodelsCache’s past year of commit activity
    Python 0 CC0-1.0 1 0 0 Updated Feb 1, 2025
  • tellurium Public

    Python Environment for Modeling and Simulating Biological Systems

    sys-bio/tellurium’s past year of commit activity
    Python 110 Apache-2.0 37 123 4 Updated Jan 30, 2025
  • PaperSummaryDataset Public

    A workflow for generating summaries of research papers on biological models using generative AI.

    sys-bio/PaperSummaryDataset’s past year of commit activity
    Python 0 MIT 0 0 2 Updated Jan 27, 2025
  • makesbml Public

    Simple site to convert antimony to sbml

    sys-bio/makesbml’s past year of commit activity
    JavaScript 1 Apache-2.0 1 1 1 Updated Jan 22, 2025
  • libantimonyjs Public

    JavaScript version of the antimony library to support human-readable, human-writable modular model definition language.

    sys-bio/libantimonyjs’s past year of commit activity
    JavaScript 1 0 2 0 Updated Jan 22, 2025
  • AntimonyEditor Public

    Antimony Web Editor: A Web Editor for the Antimony Modeling Language

    sys-bio/AntimonyEditor’s past year of commit activity
    TypeScript 0 MIT 1 17 2 Updated Jan 22, 2025
  • llvm-13.x Public Forked from llvm/llvm-project

    The LLVM Project is a collection of modular and reusable compiler and toolchain technologies. Note: the repository does not accept github pull requests at this moment. Please submit your patches at http://reviews.llvm.org.

    sys-bio/llvm-13.x’s past year of commit activity
    LLVM 0 12,804 0 2 Updated Jan 16, 2025
  • libroadrunner-deps Public

    Dependencies for libroadrunner

    sys-bio/libroadrunner-deps’s past year of commit activity
    CMake 3 5 0 0 Updated Jan 16, 2025
  • ratesb_python Public

    Analysis of rate laws in reaction networks.

    sys-bio/ratesb_python’s past year of commit activity
    Python 1 MIT 1 15 0 Updated Jan 16, 2025
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