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Simple structural examples (#108)
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* Add PK1Model and PrestressedModel
* Add microstructure value abstraction
* Add empty internal variable for testing purposes
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@termi-official
termi-official authored Jun 17, 2024
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2 changes: 2 additions & 0 deletions docs/src/api-reference/models.md
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Expand Up @@ -42,6 +42,8 @@ StructuralModel
ExtendedHillModel
GeneralizedHillModel
ActiveStressModel
PK1Model
PrestressedMechanicalModel
```

### Passive Energies
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164 changes: 155 additions & 9 deletions examples/Manifest.toml
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Expand Up @@ -2,7 +2,7 @@

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Expand Down Expand Up @@ -142,6 +142,16 @@ git-tree-sha1 = "16351be62963a67ac4083f748fdb3cca58bfd52f"
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Expand All @@ -161,12 +171,22 @@ deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"]
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Expand Down Expand Up @@ -229,9 +249,9 @@ weakdeps = ["SparseArrays"]
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Expand Down Expand Up @@ -397,6 +417,12 @@ git-tree-sha1 = "1755070db557ec2c37df2664c75600298b0c1cfc"
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Expand Down Expand Up @@ -434,10 +460,19 @@ deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebr
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Expand All @@ -451,6 +486,12 @@ git-tree-sha1 = "23163d55f885173722d1e4cf0f6110cdbaf7e272"
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Expand Down Expand Up @@ -601,6 +642,12 @@ git-tree-sha1 = "1c6317308b9dc757616f0b5cb379db10494443a7"
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Expand Down Expand Up @@ -635,6 +682,12 @@ git-tree-sha1 = "72a4842f93e734f378cf381dae2ca4542f019d23"
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Expand Down Expand Up @@ -835,6 +888,12 @@ git-tree-sha1 = "ec632f177c0d990e64d955ccc1b8c04c485a0950"
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Expand Down Expand Up @@ -1204,6 +1263,12 @@ git-tree-sha1 = "a560dd966b386ac9ae60bdd3a3d3a326062d3c3e"
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Expand Down Expand Up @@ -1443,6 +1508,16 @@ git-tree-sha1 = "1865d0b8a2d91477c8b16b49152a32764c7b1f5f"
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Expand Down Expand Up @@ -1528,6 +1603,12 @@ git-tree-sha1 = "a0b464d183da839699f4c79e7606d9d186ec172c"
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Expand Down Expand Up @@ -1648,6 +1729,18 @@ git-tree-sha1 = "13652491f6856acfd2db29360e1bbcd4565d04f1"
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Expand All @@ -1659,6 +1752,12 @@ git-tree-sha1 = "dfdf5519f235516220579f949664f1bf44e741c5"
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Expand Down Expand Up @@ -1758,6 +1857,12 @@ git-tree-sha1 = "36d8b4b899628fb92c2749eb488d884a926614d3"
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Expand Down Expand Up @@ -1823,6 +1928,12 @@ uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
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Expand Down Expand Up @@ -1903,6 +2014,12 @@ git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7"
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Expand Down Expand Up @@ -2057,6 +2174,11 @@ git-tree-sha1 = "5d7e3f4e11935503d3ecaf7186eac40602e7d231"
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Expand Down Expand Up @@ -2192,6 +2314,18 @@ weakdeps = ["ChainRulesCore", "InverseFunctions"]
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StatsFunsInverseFunctionsExt = "InverseFunctions"

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Expand Down Expand Up @@ -2226,6 +2360,18 @@ deps = ["Artifacts", "Libdl", "libblastrampoline_jll"]
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1 change: 1 addition & 0 deletions examples/Project.toml
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Expand Up @@ -5,6 +5,7 @@ FerriteGmsh = "4f95f4f8-b27c-4ae5-9a39-ea55e634e36b"
GLMakie = "e9467ef8-e4e7-5192-8a1a-b1aee30e663a"
LinearSolve = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
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Thunderbolt = "909927c2-98d5-4a67-bba9-79f03a9ad49b"
UnPack = "3a884ed6-31ef-47d7-9d2a-63182c4928ed"
2 changes: 1 addition & 1 deletion examples/lv-with-mtk-circuit.jl
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@@ -1,5 +1,5 @@
# NOTE This example is work in progress. Please consult it at a later time again.
using CirculatorySystemModels, ModelingToolkit, ModelingToolkit.OrdinaryDiffEq
using CirculatorySystemModels, ModelingToolkit, OrdinaryDiffEq
using GLMakie

using Thunderbolt
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4 changes: 2 additions & 2 deletions examples/ring.jl
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Expand Up @@ -130,8 +130,8 @@ for (u, t) in OS.TimeChoiceIterator(integrator, tspan[1]:dtvis:tspan[2])

C = tdot(F)
E = (C-one(C))/2.0
f₀,s₀,n₀ = evaluate_coefficient(problem.f.constitutive_model.microstructure_model, cell, qp, time)

coeff = evaluate_coefficient(problem.f.constitutive_model.microstructure_model, cell, qp, time)
f₀,s₀,n₀ = coeff.f, coeff.s, coeff.n
E_ff_cell += f₀ ⋅ E ⋅ f₀

f₀_current = F⋅f₀
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4 changes: 4 additions & 0 deletions src/Thunderbolt.jl
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Expand Up @@ -121,6 +121,8 @@ export
StructuralModel,
QuasiStaticProblem,
QuasiStaticNonlinearFunction,
PK1Model,
PrestressedMechanicalModel,
# Passive material models
NullEnergyModel,
NullCompressionPenalty,
Expand Down Expand Up @@ -171,6 +173,8 @@ export
# Microstructure
AnisotropicPlanarMicrostructureModel,
OrthotropicMicrostructureModel,
OrthotropicMicrostructure,
TransverselyIsotropicMicrostructure,
create_simple_microstructure_model,
# Coordinate system
LVCoordinateSystem,
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20 changes: 17 additions & 3 deletions src/modeling/common.jl
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Original file line number Diff line number Diff line change
@@ -1,13 +1,27 @@
# Common modeling primitives are found here

# TODO actually use this :)
abstract type SteadyStateInternalVariable end

struct EmptyInternalVariableModel <: SteadyStateInternalVariable
end

struct EmptyInternalVariableCache
end

struct EmptyInternalVariable
end

setup_internal_model_cache(cv, ::EmptyInternalVariableModel) = EmptyInternalVariableCache()

function state(model_cache::EmptyInternalVariableCache, geometry_cache, qp::QuadraturePoint, time)
return EmptyInternalVariable()
end

abstract type AbstractSourceTerm end

include("core/coefficients.jl")

include("core/boundary_conditions.jl")

abstract type AbstractSourceTerm end
abstract type AbstractBilinearIntegrator end
include("core/mass.jl")
include("core/diffusion.jl")
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