Update DESCRIPTION

tesselle · Sep 20, 2019 · e740335 · e740335
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diff --git a/.zenodo.json b/.zenodo.json
@@ -1,5 +1,5 @@
 {
-    "description": "<p>An easy way to examine archaeological count data (artifacts, faunal remains, etc.). This package includes several measures of diversity: e.g.&nbsp; richness and rarefaction (Chao1, Chao2, ACE, ICE, etc.), diversity/dominance and evenness (Brillouin, Shannon, Simpson, etc.), turnover and similarity (Brainerd-Robinson, ...). Most of these methods are described and discussed in Maguran (1988) &lt;doi:10.1007/978-94-015-7358-0&gt;. It also provides matrix seriation methods (reciprocal ranking, CA-based seriation) for chronological modeling and dating. The package make it easy to visualize count data and statistical thresholds: rank/abundance plots, Ford (1972) &lt;isbn:0913134082&gt; and Bertin (1977) &lt;isbn:2082111121&gt; diagrams, etc.</p>",
+    "description": "<p>An easy way to examine archaeological count data. This package provides a convenient and reproducible toolkit for relative and absolute dating and analysis of (chronological) patterns. It includes functions for matrix seriation (reciprocal ranking, CA-based seriation), chronological modeling and dating of archaeological assemblages and/or objects. Beyond these, the package provides several tests and measures of diversity: heterogeneity and evenness (Brillouin, Shannon, Simpson, etc.), richness and rarefaction (Chao1, Chao2, ACE, ICE, etc.), turnover and similarity (Brainerd-Robinson, etc.). The package make it easy to visualize count data and statistical thresholds: rank vs. abundance plots, heatmaps, Ford (1962) and Bertin (1977) diagrams.</p>",
     "creators": [
         {
             "orcid": "0000-0001-5759-4944",
@@ -30,6 +30,12 @@
             "affiliation": "Universit\u00e9 de Nantes",
             "type": "Other",
             "name": "Philippe, Anne"
+        },
+        {
+            "orcid": "0000-0002-1061-4642",
+            "affiliation": "CNRS",
+            "type": "Other",
+            "name": "Fourvel, Jean-Baptiste"
         }
     ],
     "license": "GPL-3.0",

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -30,8 +30,8 @@ Authors@R:
       person(given = "Jean-Baptiste",
              family = "Fourvel",
              role = "ctb",
-             email = "[email protected]",
-             comment = c(ORCID = "https://orcid.org/0000-0002-1061-4642 ")))
+             email = "[email protected]",
+             comment = c(ORCID = "https://orcid.org/0000-0002-1061-4642")))
 Maintainer: Nicolas Frerebeau
     <[email protected]>
 Description: An easy way to examine archaeological count data. This package 

diff --git a/README.Rmd b/README.Rmd
@@ -247,7 +247,7 @@ plot_time(merzbach_count, highlight = "FIT", roll = TRUE) +
 ```
 
 ## Contributing
-Please note that the `tabula` project is released with a [Contributor Code of Conduct](CODE_OF_CONDUCT.md). By contributing to this project, you agree to abide by its terms.
+Please note that the `tabula` project is released with a [Contributor Code of Conduct](https://github.com/nfrerebeau/tabula/blob/master/.github/CODE_OF_CONDUCT.md). By contributing to this project, you agree to abide by its terms.
 
 [^1]: Adapted from Dan Gopstein's original [idea](https://dgopstein.github.io/articles/spot-matrix/).
 [^2]: Adapted from Ben Marwick's original [idea](https://github.com/benmarwick/signatselect/).
diff --git a/README.md b/README.md
@@ -174,7 +174,7 @@ incidence <- IncidenceMatrix(data = sample(0:1, 400, TRUE, c(0.6, 0.4)),
 # Correspondance analysis-based seriation
 (indices <- seriate_reciprocal(incidence, margin = c(1, 2)))
 #> Permutation order for matrix seriation: 
-#>    Matrix ID: 647a4ee7-2f20-4632-98e9-fb006408c011 
+#>    Matrix ID: 7ff145b5-32f6-4f16-a298-37c6eb6a46a9 
 #>    Row order: 1 4 20 3 9 16 19 10 13 2 11 7 17 5 6 18 14 15 8 12 
 #>    Column order: 1 16 9 4 8 14 3 20 13 2 6 18 7 17 5 11 19 12 15 10 
 #>    Method: reciprocal
@@ -312,8 +312,9 @@ plot_time(merzbach_count, highlight = "FIT", roll = TRUE) +
 ## Contributing
 
 Please note that the `tabula` project is released with a [Contributor
-Code of Conduct](CODE_OF_CONDUCT.md). By contributing to this project,
-you agree to abide by its terms.
+Code of
+Conduct](https://github.com/nfrerebeau/tabula/blob/master/.github/CODE_OF_CONDUCT.md).
+By contributing to this project, you agree to abide by its terms.
 
 1.  Adapted from Dan Gopstein’s original
     [idea](https://dgopstein.github.io/articles/spot-matrix/).

diff --git a/codemeta.json b/codemeta.json
@@ -5,8 +5,8 @@
   ],
   "@type": "SoftwareSourceCode",
   "identifier": "tabula",
-  "description": "An easy way to examine archaeological count data. This package provides a convenient and reproducible toolkit for relative and absolute dating and analysis of (chronological) patterns. It includes functions for matrix seriation (reciprocal ranking, CA-based seriation), chronological modeling and dating of archaeological assemblages and/or objects.  Beyond these, the package provides several tests and measures of diversity: heterogeneity and evenness (Brillouin, Shannon, Simpson, etc.),  richness and rarefaction (Chao1, Chao2, ACE, ICE, etc.), turnover and similarity (Brainerd-Robinson, etc.).  The package make it easy to visualize count data and statistical thresholds: rank vs. abundance plots, heatmaps, Ford (1962) and Bertin (1977) diagrams.",
-  "name": "tabula: Analysis, Seriation and Visualization of Archaeological  Count Data",
+  "description": "An easy way to examine archaeological count data. This package provides a convenient and reproducible toolkit for relative and absolute dating and analysis of (chronological) patterns. It includes functions for matrix seriation (reciprocal ranking, CA-based seriation), chronological modeling and dating of archaeological assemblages and/or objects. Beyond these, the package provides several tests and measures of diversity: heterogeneity and evenness (Brillouin, Shannon, Simpson, etc.), richness and rarefaction (Chao1, Chao2, ACE, ICE, etc.), turnover and similarity (Brainerd-Robinson, etc.). The package make it easy to visualize count data and statistical thresholds: rank vs. abundance plots, heatmaps, Ford (1962) and Bertin (1977) diagrams.",
+  "name": "tabula: Analysis, Seriation and Visualization of Archaeological Count Data",
   "codeRepository": "http://github.com/nfrerebeau/tabula",
   "relatedLink": [
     "http://tabula.archaeo.science",
@@ -70,8 +70,8 @@
       "@type": "Person",
       "givenName": "Jean-Baptiste",
       "familyName": "Fourvel",
-      "email": "[email protected]",
-      "@id": "https://orcid.org/0000-0002-1061-4642 "
+      "email": "[email protected]",
+      "@id": "https://orcid.org/0000-0002-1061-4642"
     }
   ],
   "copyrightHolder": {},