Group workspace crates first in top-level Cargo.toml and deduplicate yansi and toml dependencies #3214
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Proposed changes
Separately group workspace crates and dependencies in top-level Cargo.toml so it's easier to see how many creates are ours and how many are external dependencies.
Also deduplicated two dependencies by aligning the versions we use with one used transitively by other dependencies.
Types of changes
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Checklist
cargo fmt
as mentioned in CODING_GUIDELINEScargo clippy
as mentioned in CODING_GUIDELINESFurther comments