SMT from conda-forge + micromamba CI (#66)

* use smt from conda forge * try updated setup miniconda action * try mamba ... * this worked locally... * try this... * create-args for poython version * touch setup.cfg * activate env * conda activate no good * require setuptools>=64 * add packages * double def * python -m pip vs pip? * get versions... * specify python version * more attempts... * try no caching * trying this... * try micromamba shell * cleanup * build docs with micromamba * Use docs env file * check python version right before coverage run
timothyas · Nov 29, 2023 · de100d4 · de100d4
1 parent bcdbd78
commit de100d4
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Showing 3 changed files with 33 additions and 31 deletions.
diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml
@@ -12,6 +12,10 @@ on:
     branches:
       - "*"
 
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
 jobs:
   build:
     name: Build (${{ matrix.python-version }} | ${{ matrix.os }})
@@ -23,24 +27,24 @@ jobs:
         python-version: ["3.9", "3.10", "3.11"]
     steps:
       - uses: actions/checkout@v3
-      - name: Cache conda
-        uses: actions/cache@v3
-        env:
-          # Increase this value to reset cache if ci/environment.yaml has not changed
-          CACHE_NUMBER: 0
-        with:
-          path: ~/conda_pkgs_dir
-          key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('ci/environment.yaml') }}
-      - uses: conda-incubator/setup-miniconda@v2
+      - name: Create conda environment
+        uses: mamba-org/setup-micromamba@v1
         with:
-          activate-environment: xesn # Defined in ci/environment*.yml
-          auto-update-conda: false
-          python-version: ${{ matrix.python-version }}
+          cache-downloads: true
+          cache-environment: true
+          micromamba-version: "latest"
           environment-file: ci/environment.yaml
-          use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
+          create-args: python=${{ matrix.python-version }}
+      - name: Install xesn
+        shell: micromamba-shell {0}
+        run: |
+          python -V
+          python -c "import setuptools; print(setuptools.__version__)"
+          python -m pip install -e . --no-deps
       - name: Run Unit Tests
         shell: bash -l {0}
         run: |
+          python -V
           coverage run --rcfile=coverage.toml -m pytest --verbose xesn/test/matrix.py xesn/test/esn.py xesn/test/lazy.py xesn/test/xdata.py xesn/test/optim.py xesn/test/psd.py xesn/test/cost.py xesn/test/driver.py
       - name: Get coverage report
         shell: bash -l {0}
@@ -52,5 +56,3 @@ jobs:
           token: ${{ secrets.CODECOV_TOKEN }}
           files: ./coverage.xml
           flags: unittests # optional
-
-
diff --git a/.github/workflows/sphinx.yaml b/.github/workflows/sphinx.yaml
@@ -9,21 +9,21 @@ jobs:
   docs:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
-      - name: Cache conda
-        uses: actions/cache@v2
-        env:
-          CACHE_NUMBER: 0
+      - uses: actions/checkout@v3
+      - name: Create conda environment
+        uses: mamba-org/setup-micromamba@v1
         with:
-          path: ~/conda_pkgs_dir
-          key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('docs/environment.yaml') }}
-      - uses: conda-incubator/setup-miniconda@v2
-        with:
-          activate-environment: xesn
-          auto-update-conda: false
-          python-version: 3.11
+          cache-downloads: true
+          cache-environment: true
+          micromamba-version: "latest"
           environment-file: docs/environment.yaml
-          use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
+          create-args: python=${{ matrix.python-version }}
+      - name: Install xesn
+        shell: micromamba-shell {0}
+        run: |
+          python -V
+          python -c "import setuptools; print(setuptools.__version__)"
+          python -m pip install -e . --no-deps
       - name: Build Docs
         shell: bash -l {0}
         run: |

diff --git a/pyproject.toml b/pyproject.toml
@@ -26,8 +26,8 @@ source="https://github.com/timothyas/xesn"
 documentation="https://xesn.readthedocs.io/en/latest/"
 
 [build-system]
-requires = ["setuptools", "setuptools-scm"]
+requires = ["setuptools>=64.0.0", "setuptools-scm"]
 build-backend = "setuptools.build_meta"
 
-[tool.setuptools.packages.find]
-where = ["xesn"]
+[tool.setuptools]
+packages = ["xesn"]