md5 error fix #226
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| on: push | |
| name: CI | |
| concurrency: | |
| group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}' | |
| cancel-in-progress: true | |
| jobs: | |
| Security: | |
| name: Security Pipeline | |
| uses: uc-cdis/.github/.github/workflows/securitypipeline.yaml@master | |
| with: | |
| python-poetry: 'true' | |
| secrets: inherit | |
| UnitTest: | |
| name: Python Unit Test with Postgres | |
| uses: uc-cdis/.github/.github/workflows/python_unit_test.yaml@master | |
| with: | |
| test-script: 'bin/test.sh' | |
| python-version: '3.9' | |
| use-cache: true | |
| # run-coveralls: true # TODO enable once the repo is public | |
| # # this creates linter settings and uploads to an artifact so the configs can be pulled and used across jobs | |
| # LintConfig: | |
| # name: Get Lint Config | |
| # uses: uc-cdis/.github/.github/workflows/lint-create-config.yaml@master | |
| # with: | |
| # python-module-name: "gen3workflow" | |
| # RequiredLint: | |
| # name: Run Required Linters | |
| # needs: [LintConfig] | |
| # uses: uc-cdis/.github/.github/workflows/required_lint_check.yaml@master | |
| # with: | |
| # python-version: '3.9' | |
| # use-cache: true | |
| # InformationalLint: | |
| # name: Run Informational Linters | |
| # needs: [LintConfig, UnitTest] | |
| # if: github.ref != 'refs/heads/master' | |
| # uses: uc-cdis/.github/.github/workflows/optional_lint_check.yaml@master | |
| # with: | |
| # python-version: '3.9' | |
| # use-cache: true | |
| ImageBuildAndPush: | |
| name: Build Image and Push | |
| uses: uc-cdis/.github/.github/workflows/image_build_push.yaml@master | |
| # needs: [RequiredLint, Security, UnitTest] | |
| with: | |
| BUILD_PLATFORMS: "linux/amd64, linux/arm64" | |
| secrets: | |
| ECR_AWS_ACCESS_KEY_ID: ${{ secrets.ECR_AWS_ACCESS_KEY_ID }} | |
| ECR_AWS_SECRET_ACCESS_KEY: ${{ secrets.ECR_AWS_SECRET_ACCESS_KEY }} | |
| QUAY_USERNAME: ${{ secrets.QUAY_USERNAME }} | |
| QUAY_ROBOT_TOKEN: ${{ secrets.QUAY_ROBOT_TOKEN }} |