…essfully, but won't run correctly.

cleanup create_nems_configure_file.py to use arguments rather than environment variables,
add fire capabilities

 - Add remainder of configurable fire namelist options to config_defaults
 - Add fire namelist filenames and paths to config_defaults
 - Add LEVP (number of vertical levels) as a config variable, and explicitly
   set levp and npz as namelist variables. This will require some updates to documentation
 - Generate the majority of the UFS_FIRE namelist in the workflow generation script. The
   rest (start and end times) will be set in the run_fcst step to account for cycling

 - Needed correct naming template for input ICS and LBCS in config.fire.yaml
 - Incorrectly formatted lines in create_nems_configure_file.py
 - Fix incorrect namelist location for levp
 - Forgot to ignore FIRE_INPUT_DIR when creating &fire namelist

 - Fill in &time namelist section
 - Link namelist.fire to namelist.input for now (until we can get the name changed)
 - Link in geo_em file

Stuck on namelist errors for now due to old weather model hash.

…file does not exist. This avoids weird error handling from calling an argparse error class.

 - Force bash to output decimal numbers when creating fire namelist
 - Remove rogue ln command

 - Create a new variable FIRE_NUM_TASKS to choose the number of tasks to assign to the fire behavior model.
 - Modify PE_MEMBER01 so it accounts for FIRE_NUM_TASKS if set
 - Check that FIRE_NUM_TASKS is positive if running the fire model
 - Remove last remnants of old namelist variables
 - Update nems.configure to assign weather model to first petlist, then the fire tasks last

 - Remove deprecated namelist options "fire_grows_only" and "fire_lfn_ext_up"
 - Add functionality to create_diag_table_file.py that gives the ability to add additional entries to an existing diag_table
 - When UFS_FIRE is active, add line to diag_table for "fsmoke" tracer

…_workflow

Resolved Conflicts:
	Externals.cfg
	parm/ufs.configure
	ush/create_ufs_configure_file.py
	ush/generate_FV3LAM_wflow.py
	ush/get_crontab_contents.py
	ush/set_namelist.py

…ack where it should be!

…_workflow

…ile. This gives ~5x speedup for create_symlink_to_file on derecho

 - No more usage function in create_symlink_to_file()
 - Updates for new uwtools functionality

…l (e.g. {fyyyy}, {fhh}, {fyyyymmdd}, etc) to supplement the current templates based on cycle date

…_workflow

…te to build library versions

 - Rename ufs_srweather_app.settings --> build_settings.yaml, make yaml format for easy reading
 - Add "Application" and "Git hash" to build_settings.yaml
 - Read build_settings.yaml in setup.py to determine if App was built with fire capabilities

…l platforms

…hreading in current develop

…_workflow

… made this improvement months ago!

… print in debug mode

… to run these tests locally...

…lure

…"aqm" directory to "special_builds" directory to go with fire

…_workflow

…fix indentation, fix intra-chapter link

Co-authored-by: Christina Holt <[email protected]>

…name fire test to indicate its one-way coupled

…s, make all the ignition-specific variables lists of length FIRE_NUM_IGNITIONS

…ne consistency in setup.py, convert some logging calls to specific logger object

 - Fix missing values for fire namelist logic in workflow generation

… list

…iptions of config options

Initial capability needs FIRE_ATM_FEEDBACK=0.0

FIRE_ATM_FEEDBACK = 0.0

FIRE_ATM_FEEDBACK = 0.0

 - New variable to WE2E test data, we should use this to consolidate test variables in the future
 - Shorten fire tests to 3 hours
 - Fix extra prints in workflow generation