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Updated config/icav2.yaml to include new bundles
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github-actions[bot] committed Nov 6, 2024
1 parent f66f7c7 commit fd523b9
Showing 1 changed file with 211 additions and 5 deletions.
216 changes: 211 additions & 5 deletions config/icav2.yaml
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Expand Up @@ -1744,7 +1744,7 @@ bunches:
bunch_description: |
Contains the UMCCR dragen-transcriptome-pipeline, validation data and the appropriate reference data for dragen version 4.3.6
tenant_name: umccr-prod
pipeline_path:
pipeline_path:
workflows/dragen-transcriptome-pipeline/4.3.6/dragen-transcriptome-pipeline__4.3.6.cwl
pipeline_project_name: pipelines
bunch_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
Expand Down Expand Up @@ -1812,7 +1812,7 @@ bunches:
bunch_description: |
Contains the UMCCR dragen-transcriptome-pipeline, and appropriate reference data for dragen version 4.3.6
tenant_name: umccr-prod
pipeline_path:
pipeline_path:
workflows/dragen-transcriptome-pipeline/4.3.6/dragen-transcriptome-pipeline__4.3.6.cwl
pipeline_project_name: pipelines
bunch_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
Expand Down Expand Up @@ -2036,13 +2036,13 @@ bunches:
- dataset_name: dragen_hash_table_hg38_alt_masked_v9_r3_linear_cnv_hla_rna
dataset_creation_time: '2024-06-21T09:21:42Z'
dataset_id_hash: a5fe1d2e2fe35737bdbc0871d46878e1

# Validation 4.3.6
- bunch_name: dragen_somatic_with_germline_pipeline_with_validation_data__4_3_6
bunch_description: |
Contains the UMCCR dragen-somatic_with_germline-pipeline, validation data and the appropriate reference data for dragen version 4.3.6
tenant_name: umccr-prod
pipeline_path:
pipeline_path:
workflows/dragen-somatic-with-germline-pipeline/4.3.6/dragen-somatic-with-germline-pipeline__4.3.6.cwl
pipeline_project_name: pipelines
bunch_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
Expand Down Expand Up @@ -2104,7 +2104,7 @@ bunches:
bunch_description: |
Contains the UMCCR dragen-somatic_with_germline-pipeline, and the appropriate reference data for dragen version 4.3.6
tenant_name: umccr-prod
pipeline_path:
pipeline_path:
workflows/dragen-somatic-with-germline-pipeline/4.3.6/dragen-somatic-with-germline-pipeline__4.3.6.cwl
pipeline_project_name: pipelines
bunch_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
Expand Down Expand Up @@ -4844,3 +4844,209 @@ bundles:
- development
- staging
- production
- bundle_name: dragen_alignment_pipeline_with_validation_data__4_3_6__20241106102650
bundle_description: 'This bundle has been generated by the release of workflows/dragen-alignment-pipeline/4.3.6/dragen-alignment-pipeline__4.3.6.cwl.
The pipeline can be found at https://github.com/umccr/cwl-ica/releases/tag/dragen-alignment-pipeline/4.3.6__20241106102650. '
bundle_version: v10_r4__20241106102650
bundle_version_description: Bundle version description is currently redundant
while we cannot append versions to bundles. Regardless - the bunch version is
v10_r4
bundle_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
bundle_region_city_name: Sydney
tenant_name: umccr-prod
pipeline_path: workflows/dragen-alignment-pipeline/4.3.6/dragen-alignment-pipeline__4.3.6.cwl
pipeline_name: dragen-alignment-pipeline
pipeline_version: 4.3.6
pipeline_release_url:
https://github.com/umccr/cwl-ica/releases/tag/dragen-alignment-pipeline/4.3.6__20241106102650
pipeline_commit_id: dragen-alignment-pipeline/4.3.6__20241106102650
pipeline_checksum: cc4d8f38e17006edcd6acb18cf7dea5a
pipeline_project_id: 5844391a-69db-4b52-86b5-6a0d55c2386f
bundle_creation_time: '2024-11-06T10:29:12Z'
bundle_release_status: draft
bunch_name: dragen_alignment_pipeline_with_validation_data__4_3_6
bunch_version: v10_r4
bunch_datasets:
- dataset_name: dragen_hash_table_chm13_v2_v10_r4_graph_cnv_hla_rna
dataset_creation_time: '2024-11-04T02:05:03Z'
dataset_id_hash: 9511ca5eb8a31b30dd4ee8d80d83cb93
- dataset_name: dragen_hash_table_chm13_v2_v10_r4_linear_cnv_hla_rna_methylated_combined
dataset_creation_time: '2024-11-05T23:16:55Z'
dataset_id_hash: f62a6eb3655012f0f01bb3372d0e7029
- dataset_name: dragen_hash_table_hg38_alt_masked_v10_r4_graph_cnv_hla_rna
dataset_creation_time: '2024-11-04T01:55:11Z'
dataset_id_hash: d6ac5cf3214df27d63a634cbe725ebea
- dataset_name: dragen_hash_table_hg38_alt_masked_v10_r4_linear_cnv_hla_rna_methylated_combined
dataset_creation_time: '2024-11-05T23:19:50Z'
dataset_id_hash: e3d80dec2012c2e65627b68ee9a07293
- dataset_name: hg38_v39_gencode_annotation
dataset_creation_time: '2024-07-08T01:23:37Z'
dataset_id_hash: 7e88d10c15bfc88ee2e9527962c63984
- dataset_name: wgs_validation_fastq__cups_pair_8
dataset_creation_time: '2024-06-21T09:35:36Z'
dataset_id_hash: fca2fb140731ea7900d2c5c96061a280
- dataset_name: wgs_validation_fastq__2016_249_17_MH_P033
dataset_creation_time: '2024-06-21T09:37:03Z'
dataset_id_hash: ab2e2265f84e64ff9687b6e8a3f5c5d4
- dataset_name: wgs_validation_fastq__2016_249_18_WH_P025
dataset_creation_time: '2024-06-21T09:37:36Z'
dataset_id_hash: 48b0a8616df58b94ec6f358037850f1e
- dataset_name: wgs_validation_fastq__B_ALL_Case_10
dataset_creation_time: '2024-06-21T09:38:04Z'
dataset_id_hash: 3938ab2e04aae0156897f3fee3676ac2
- dataset_name: wgs_validation_fastq_Diploid_Never_Responder
dataset_creation_time: '2024-06-21T09:38:33Z'
dataset_id_hash: 45c8ce2f0995873364f760ca797c5c6a
- dataset_name: wgs_validation_fastq_SBJ00303
dataset_creation_time: '2024-06-21T09:39:42Z'
dataset_id_hash: ebfe847356803cb27a8009deedf30944
- dataset_name: wgs_validation_fastq_SEQC50
dataset_creation_time: '2024-06-21T09:40:14Z'
dataset_id_hash: 2e5fbe564ac04069f3fc2cd254465dd8
- dataset_name: wgs_validation_fastq_SFRC01073
dataset_creation_time: '2024-06-21T09:40:51Z'
dataset_id_hash: deac29472b118a9b51889a661e804cd8
- dataset_name: wts_validation_fastq__SBJ00480
dataset_creation_time: '2024-06-21T09:41:15Z'
dataset_id_hash: c8b8bdc7e384aaa470b12992ce196693
- dataset_name: wts_validation_fastq__SBJ00028
dataset_creation_time: '2024-06-21T09:42:31Z'
dataset_id_hash: fa76e6ca3a0fb0be2bf41840a7aeeb01
- dataset_name: wts_validation_fastq__SBJ00061
dataset_creation_time: '2024-06-21T09:42:54Z'
dataset_id_hash: 63ee438354c347b05218b9bddc53d936
- dataset_name: wts_validation_fastq__SBJ00188
dataset_creation_time: '2024-06-21T09:43:11Z'
dataset_id_hash: 401d12d90e00db19918e5c9ce13a3da0
- dataset_name: wts_validation_fastq__SBJ00199
dataset_creation_time: '2024-06-21T09:49:27Z'
dataset_id_hash: b95ac04c7e3c03a8b1868a4571d23d5f
- dataset_name: wts_validation_fastq__SBJ00236
dataset_creation_time: '2024-06-21T09:49:54Z'
dataset_id_hash: f084081c52ddda14328294d7bb7f13f4
- dataset_name: wts_validation_fastq__SBJ00238
dataset_creation_time: '2024-06-21T09:50:29Z'
dataset_id_hash: ba04ff08acbfbd1c17f1aadc0e8b3cf5
bundle_id: c01829f8-ed84-4850-870f-7aefece9bff4
bundle_data_ids:
- fil.523d8dcc66b443987ade08dcf793071e
- fil.046e468bff4240486a6a08dcfd053b95
- fil.066636f433c441317b4708dcf793071e
- fil.030e1b16b3aa4a2d6a2a08dcfd053b95
- fil.962f7248f6bb4d4b9b1f08dc9833b59f
- fil.fc89c78d9e5d49016fdf08dc8578d1b7
- fil.1f3dff24328544ed6fe808dc8578d1b7
- fil.820d738a6b4147446f6108dc8578d1b7
- fil.bdbd68814e784f826f6c08dc8578d1b7
- fil.844c8e5a9af44b3e6fb308dc8578d1b7
- fil.b25812a50e6146d86fb508dc8578d1b7
- fil.1d6efec072b7499f297a08dc8578d21e
- fil.8202bfaf8b3c44d86f0a08dc8578d1b7
- fil.2a4ed15a76b044da6f0c08dc8578d1b7
- fil.01366fbbb2f641106f1008dc8578d1b7
- fil.84571fa14bcb4ebe6ec108dc8578d1b7
- fil.03003c8566404e0d295108dc8578d21e
- fil.4b888dbf5d0b494b29b108dc8578d21e
- fil.ef151fe0eed643dc29b208dc8578d21e
- fil.3ce7d237182749bf6f0f08dc8578d1b7
- fil.5b8d57e3e521471f299808dc8578d21e
- fil.d5738aa4a53c46356fb208dc8578d1b7
- fil.34f231309a4d45b96fb408dc8578d1b7
- fil.3359a5a0bfa1479f6fec08dc8578d1b7
- fil.12993a6849144556701108dc8578d1b7
- fil.c1010f3b659a4317707208dc8578d1b7
- fil.2f862dcab5bb422d707308dc8578d1b7
- fil.a84ca36c0f6b49f5704a08dc8578d1b7
- fil.7bc585d90a9e45ee704b08dc8578d1b7
- fil.1dfd6a013088441771f108dc8578d1b7
- fil.e5a701e223534a3871f208dc8578d1b7
- fil.614a2ba2838b4032722908dc8578d1b7
- fil.9cae8faaf6d54e1d763c08dc8682e79a
- fil.736453496b8d4262766108dc8682e79a
- fil.b57ab0c1ec0b4c81766008dc8682e79a
- fil.5bd5ed8c97d2453471f008dc8578d1b7
- fil.9f96daa8e276454c75e408dc8682e79a
- fil.00db7f575e3c4741766608dc8682e79a
- fil.848678f252004cae726508dc8578d1b7
- fil.e47895b2674b40cf727508dc8578d1b7
- fil.f7b97fcf876b4409727608dc8578d1b7
- fil.ad6640db600e44e1727a08dc8578d1b7
- fil.6e3e68b7fc8b48ef76a908dc8682e79a
- fil.25ae81b4f33146b2769708dc8682e79a
- fil.dc806da29f02402076aa08dc8682e79a
- fil.8ed5724bce234ff276ad08dc8682e79a
- fil.2c3073bee29c47ea76ae08dc8682e79a
- fil.a191c268b58b414972ae08dc8578d1b7
- fil.f4d61a69d418416a76af08dc8682e79a
- fil.554ab8b39c49488a76b208dc8682e79a
- fil.728b7d6332dd4d2e72af08dc8578d1b7
bundle_pipeline_id: e22e34e7-5bb9-475f-ba0b-7fc184a83521
bundle_url:
https://ica.illumina.com/ica/bundles/c01829f8-ed84-4850-870f-7aefece9bff4/bundleDetails
bundle_categories:
- wgs
- wts
- alignment
- qc
- validation
- primary-analysis
projects:
- development
- staging
- bundle_name: dragen_alignment_pipeline_prod__4_3_6__20241106102650
bundle_description: 'This bundle has been generated by the release of workflows/dragen-alignment-pipeline/4.3.6/dragen-alignment-pipeline__4.3.6.cwl.
The pipeline can be found at https://github.com/umccr/cwl-ica/releases/tag/dragen-alignment-pipeline/4.3.6__20241106102650. '
bundle_version: v10_r4__20241106102650
bundle_version_description: Bundle version description is currently redundant
while we cannot append versions to bundles. Regardless - the bunch version is
v10_r4
bundle_region_id: 1efd315d-6309-4d7e-826b-d3824b0b5acb
bundle_region_city_name: Sydney
tenant_name: umccr-prod
pipeline_path: workflows/dragen-alignment-pipeline/4.3.6/dragen-alignment-pipeline__4.3.6.cwl
pipeline_name: dragen-alignment-pipeline
pipeline_version: 4.3.6
pipeline_release_url:
https://github.com/umccr/cwl-ica/releases/tag/dragen-alignment-pipeline/4.3.6__20241106102650
pipeline_commit_id: dragen-alignment-pipeline/4.3.6__20241106102650
pipeline_checksum: cc4d8f38e17006edcd6acb18cf7dea5a
pipeline_project_id: 5844391a-69db-4b52-86b5-6a0d55c2386f
bundle_creation_time: '2024-11-06T10:36:27Z'
bundle_release_status: draft
bunch_name: dragen_alignment_pipeline_prod__4_3_6
bunch_version: v10_r4
bunch_datasets:
- dataset_name: dragen_hash_table_chm13_v2_v10_r4_graph_cnv_hla_rna
dataset_creation_time: '2024-11-04T02:05:03Z'
dataset_id_hash: 9511ca5eb8a31b30dd4ee8d80d83cb93
- dataset_name: dragen_hash_table_chm13_v2_v10_r4_linear_cnv_hla_rna_methylated_combined
dataset_creation_time: '2024-11-05T23:16:55Z'
dataset_id_hash: f62a6eb3655012f0f01bb3372d0e7029
- dataset_name: dragen_hash_table_hg38_alt_masked_v10_r4_graph_cnv_hla_rna
dataset_creation_time: '2024-11-04T01:55:11Z'
dataset_id_hash: d6ac5cf3214df27d63a634cbe725ebea
- dataset_name: dragen_hash_table_hg38_alt_masked_v10_r4_linear_cnv_hla_rna_methylated_combined
dataset_creation_time: '2024-11-05T23:19:50Z'
dataset_id_hash: e3d80dec2012c2e65627b68ee9a07293
- dataset_name: hg38_v39_gencode_annotation
dataset_creation_time: '2024-07-08T01:23:37Z'
dataset_id_hash: 7e88d10c15bfc88ee2e9527962c63984
bundle_id: 9d436c03-c2a2-4cea-90e8-d8c84353846b
bundle_data_ids:
- fil.523d8dcc66b443987ade08dcf793071e
- fil.046e468bff4240486a6a08dcfd053b95
- fil.066636f433c441317b4708dcf793071e
- fil.030e1b16b3aa4a2d6a2a08dcfd053b95
- fil.962f7248f6bb4d4b9b1f08dc9833b59f
bundle_pipeline_id: e22e34e7-5bb9-475f-ba0b-7fc184a83521
bundle_url:
https://ica.illumina.com/ica/bundles/9d436c03-c2a2-4cea-90e8-d8c84353846b/bundleDetails
bundle_categories:
- wgs
- wts
- alignment
- qc
- production
- primary-analysis
projects:
- production

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