Adding Crypt4GH support, found a shortcoming with this compliance sui… #11
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name: htsget-compliance | |
on: [push, pull_request] | |
jobs: | |
test: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ['3.12'] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python setup.py install | |
python -m pip install -r requirements_test.txt | |
- name: Run tests | |
run: python -m pytest --cov=ga4gh/ --cov-report=term-missing unittests/ | |
- name: Upload coverage to Coveralls | |
uses: coverallsapp/github-action@v2 | |
with: | |
github-token: ${{ secrets.GITHUB_TOKEN }} | |
docker: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Log in to GitHub Container Registry | |
uses: docker/login-action@v2 | |
with: | |
registry: ghcr.io | |
username: ${{ github.actor }} | |
password: ${{ secrets.GITHUB_TOKEN }} | |
- name: Build Docker image | |
run: docker build -t ghcr.io/${{ github.repository }}:latest . | |
- name: Push Docker image | |
run: docker push ghcr.io/${{ github.repository }}:latest |