Merge branch 'main' into vinc_dev_streaks

.github/workflows/build.yml

@@ -0,0 +1,40 @@
+name: Build and Upload Conda Package
+
+on:
+  release:
+    types:
+      - created
+
+jobs:
+  build-and-upload-conda-package:
+    if: true 
+    runs-on: ubuntu-latest
+    #${{ github.event.workflow_run.conclusion == 'success' }}
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v3
+        with:
+          fetch-depth: 0
+
+      - name: Set up Miniconda
+        uses: conda-incubator/setup-miniconda@v2
+        with:
+          auto-update-conda: true
+          python-version: 3.9
+
+      - name: Install conda-build
+        run: |
+          conda init
+          source ~/.bashrc
+          conda activate base
+          conda install -y -c conda-forge conda-build anaconda-client
+
+      - name: Build and Upload Conda package
+        env:
+          ANACONDA_TOKEN: ${{ secrets.ANACONDA_TOKEN }}
+        run: |
+          cd recipe
+          conda init
+          source ~/.bashrc 
+          conda activate base
+          conda-build . --token $ANACONDA_TOKEN --user tcevaer -c tcevaer -c conda-forge

.github/workflows/ci.yml

@@ -15,65 +15,69 @@ jobs:
 
         steps:
             # Checkout the code
-            - name: Checkout code
-              uses: actions/checkout@v4
+          - name: Checkout code
+            uses: actions/checkout@v4
 
           - uses: mamba-org/setup-micromamba@v1
             with:
                 micromamba-version: "1.5.9-1" # any version from https://github.com/mamba-org/micromamba-releases
-                channels: tcevaer, conda-forge, defaults
+                channels: tcevaer, conda-forge
                 init-shell: bash
                 post-cleanup: "all"
 
+          - name: Configure Conda channel priority to disabled
+            run: |
+                conda config --set channel_priority disabled
+
           - name: Create environment and install tools
-            run: micromamba create -n grdwind_env pytest conda-build boa python=3.10 -y -c tcevaer -c conda-forge
+            run: micromamba create -n grdwind_env pytest conda-build boa python=3.10 -y
 
           - name: Build package
             run: |
                 cd recipe
                 eval "$(micromamba shell hook --shell bash)"
                 micromamba activate grdwind_env
-                conda mambabuild . -c tcevaer -c conda-forge
+                conda mambabuild .
 
           # Install the built package into the environment
           - name: Install the built package
             run: |
                 eval "$(micromamba shell hook --shell bash)"
                 micromamba activate grdwind_env
-                conda install --use-local grdwindinversion -y -c tcevaer -c conda-forge
+                conda install --use-local grdwindinversion -y
 
             # Cache the test data if previously downloaded (up to 10 GB limit for the cache)
             # WARNING : modify the key if the data is modified !!
-            - name: Cache test data
-              uses: actions/cache@v4
-              id: cache
-              with:
-                  path: ./test_data
-                  key: test-data-v3
-                  restore-keys: test-data-v3
+          - name: Cache test data
+            uses: actions/cache@v4
+            id: cache
+            with:
+                path: ./test_data
+                key: test-data-v3
+                restore-keys: test-data-v3
 
             # Download test data if not already cached
-            - name: Download test data
-              if: steps.cache.outputs.cache-hit != 'true' # Only download if cache miss
-              run: |
+          - name: Download test data
+            if: steps.cache.outputs.cache-hit != 'true' # Only download if cache miss
+            run: |
                   mkdir -p ./test_data/
                   wget https://cloud.ifremer.fr/index.php/s/ExLQ2TnYAqozPWE/download -O /tmp/ecmwf.zip
                   unzip /tmp/ecmwf.zip -d ./test_data/
                   wget https://cloud.ifremer.fr/index.php/s/kRgdOOPsjoZieZR/download -O /tmp/l1.zip
                   unzip /tmp/l1.zip -d ./test_data/
-              timeout-minutes: 200 # Adjust depending on the size of your data
+            timeout-minutes: 200 # Adjust depending on the size of your data
 
             # Set up xsar configuration
-            - name: Setup xsar configuration
-              run: |
+          - name: Setup xsar configuration
+            run: |
                   mkdir -p ~/.xsar
                   echo "data_dir: /tmp" > ~/.xsar/config.yaml
                   echo "auxiliary_dir: ./test_data/auxiliary" >> ~/.xsar/config.yaml
                   echo "path_dataframe_aux: ./test_data/auxiliary/active_aux.csv" >> ~/.xsar/config.yaml
 
             # Set up grdwindinversion configuration
-            - name: Setup grdwindinversion configuration
-              run: |
+          - name: Setup grdwindinversion configuration
+            run: |
                   mkdir -p ~/.grdwindinversion
                   echo "'ecmwf_0100_1h': ./test_data/ECMWF/forecast/hourly/0100deg/netcdf_light/%Y/%j/ECMWF_FORECAST_0100_%Y%m%d%H%M_10U_10V.nc" > ~/.grdwindinversion/data_config.yaml
                   echo "'ecmwf_0125_1h': ./test_data/ECMWF/0.125deg/1h/forecasts/%Y/%j/ecmwf_%Y%m%d%H%M.nc" >> ~/.grdwindinversion/data_config.yaml
@@ -82,8 +86,8 @@ jobs:
                   #echo "'lut_ms1ahw_path': './test_data/GMFS/v1.6/GMF_cmodms1ahw'" >> ~/.grdwindinversion/data_config.yaml
 
             # Run the tests
-            - name: Run tests
-              run: |
+          - name: Run tests
+            run: |
                   eval "$(micromamba shell hook --shell bash)"
                   micromamba activate grdwind_env
                   pytest

pyproject.toml

@@ -14,6 +14,9 @@ dependencies = [
     "scipy",
     "fsspec",
     "aiohttp",
+    "xarray-safe-s1",
+    "xradarsat2",
+    "xarray-safe-rcm"
 ]
 
 dynamic = ["version"]