README

WIPP Image Assembling plugin

Reads multiple stitching vectors generated from MIST and creates one tiled TIFF image from tiled TIFF images per stitching vector.

Docker distribution

This plugin is available on DockerHub from the WIPP organization

docker pull wipp/wipp-image-assembling-plugin

Running the Docker container

docker run \
    -v "path/to/input/data/folder":/data/inputs \
    -v "path/to/output/folder":/data/outputs \
    wipp-image-assembling-plugin \
    --inputImages /data/inputs/"inputCollectionTiledFolder"  
    --inputStitchingVector /data/inputs/"stitchingVectorFolder" 
    --output /data/outputs