Merge branch 'main' of https://github.com/vandeplaslab/koyo

src/koyo/image.py

@@ -93,10 +93,19 @@ def reshape_array_from_coordinates(
 
 def flatten_array_from_coordinates(array: np.ndarray, coordinates: np.ndarray, offset: int = 0) -> np.ndarray:
     """Flatten array based on xy coordinates."""
-    try:
-        return array[coordinates[:, 1] - offset, coordinates[:, 0] - offset]
-    except IndexError:
-        return array[coordinates[:, 0] - offset, coordinates[:, 1] - offset]
+    if array.ndim == 2:
+        try:
+            return array[coordinates[:, 1] - offset, coordinates[:, 0] - offset]
+        except IndexError:
+            return array[coordinates[:, 0] - offset, coordinates[:, 1] - offset]
+    else:
+        try:
+            res = array[:, coordinates[:, 1] - offset, coordinates[:, 0] - offset]
+        except IndexError:
+            res = array[:, coordinates[:, 0] - offset, coordinates[:, 1] - offset]
+        # need to swap axes
+        res = np.swapaxes(res, 0, 1)
+        return res
 
 
 def reshape_array_batch(

src/koyo/rand.py

@@ -1,3 +1,7 @@
+"""Random number utilities."""
+
+from __future__ import annotations
+
 from contextlib import contextmanager
 
 import numpy as np
@@ -8,6 +12,14 @@ def get_random_seed() -> int:
     return np.random.randint(0, np.iinfo(np.int32).max - 1, 1)[0]
 
 
+def get_random_state(n: int = 1) -> int | list[int]:
+    """Retrieve random state(s)."""
+    from random import randint
+
+    state = [randint(0, 2**32 - 1) for _ in range(n)]
+    return state if n > 1 else state[0]
+
+
 @contextmanager
 def temporary_seed(seed: int, skip_if_negative_one: bool = False):
     """Temporarily set numpy seed."""

src/koyo/system.py

@@ -1,5 +1,6 @@
 """System utilities."""
 
+import inspect
 import os
 import platform
 import sys
@@ -81,3 +82,18 @@ def get_cli_path(name: str, env_key: str = "", default: str = "") -> str:
     if default:
         return default
     raise RuntimeError(f"Could not find '{name}' executable.")
+
+
+def who_called_me() -> tuple[str, str, int]:
+    """Get the file name, function name, and line number of the caller."""
+    # Get the current frame
+    current_frame = inspect.currentframe()
+    # Get the caller's frame
+    caller_frame = current_frame.f_back
+
+    # Extract file name, line number, and function name
+    file_name = caller_frame.f_code.co_filename
+    line_number = caller_frame.f_lineno
+    function_name = caller_frame.f_code.co_name
+    print(f"Called from file: {file_name}, function: {function_name}, line: {line_number}")
+    return file_name, function_name, line_number