Dev aifpaif #152
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Dev aifpaif #152
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export ipynb to .py Add references
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Hey @Frederic-vW, Thanks a lot for the tutorial !
Would you like to include your email and name at the top of the tutorial ? You can check the results here: Let me know if it looks good for you ! I will then merge this PR to #112 and merge #112 to main to include changes in the next release. |
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Thanks for the tutorial! |
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@all-contributors please add @Frederic-vW for code tutorial review |
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I've put up a pull request to add @Frederic-vW! 🎉 |
vferat
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Feb 13, 2024
* Add autoinformation Add code from https://github.com/Frederic-vW/AIF-PAIF * wip * wip * WIP * Update autoinformation.py * wip * Change entropy to use joint_entropy_history for easier maintenance * Add ais, aif, paif Finish implementation skeleton and test against original lib * wip * [wip] Add excess_entropy_rate * WIP * WIP * WIP * WIP * Fix style * Add changes to changelog * Fix residuals * WIP * WIP * WIP * Fix style * fix style * Fix import * Fix docs (wip) * Fix style and docs * clean-up and fix type-hints in entropy * Update docs/source/dev/changes/latest.rst Co-authored-by: Mathieu Scheltienne <[email protected]> * Update pycrostates/segmentation/_base.py Co-authored-by: Mathieu Scheltienne <[email protected]> * Fix @mscheltienne review * Update _typing.py * Update docs/source/dev/changes/latest.rst Co-authored-by: Mathieu Scheltienne <[email protected]> * refractor public and private API * Fix unused import * Fix bib file * Fix segmentation.entropy * Fix docstring * Fix test name * Fix footcite ? * Use :t: instead of :p: * Fix citation in autosummary * Change ignore_self to ignore_repetitions * Add ignore_repetitions docstring * Deprecate ignore_self in favour of ignore_repetitions * Add test for deprecated * Fix style * Fix docs * nitpick and typos * better deprecation * tutorial fixes * fix tutorial title * fix more * fix ruff * rm deprecation test function * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Add state_to_ignore in docdict * Add log_base and labels_info to docdict * Add segmentation to docdict * Dev aifpaif (#152) * updating 10_entropy notebook * updating 10_entropy notebook * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Update tutorial export ipynb to .py Add references * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py * updating 10_entropy notebook * Add authors * Update 10_entropy.py * Update 10_entropy.py * Update 10_entropy.py --------- Co-authored-by: “Frederic-vW” <“[email protected]”> Co-authored-by: Victor Férat <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * rm file =61.0.0 * better docstring format * rm unused bibliographic item * clean-up tutorial format * better documentation makefiles * a couple more clean-ups * better documentation build configuration * fix missed * fix dead links * fix missed * Add optipng dependency * Update .readthedocs.yaml --------- Co-authored-by: Mathieu Scheltienne <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Frederic-vW <[email protected]> Co-authored-by: “Frederic-vW” <“[email protected]”>
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entropy tutorial v1.0