Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Bump nf-core/setup-nextflow from 1 to 2 #81

Open
wants to merge 1 commit into
base: main
Choose a base branch
from

Conversation

dependabot[bot]
Copy link
Contributor

@dependabot dependabot bot commented on behalf of github Mar 1, 2024

Bumps nf-core/setup-nextflow from 1 to 2.

Release notes

Sourced from nf-core/setup-nextflow's releases.

v2.0.0

Added

  • renovate dependency automation bot (#41)

Changed

  • Upgraded GitHub Actions node version to v20 (#39)
  • GitHub Octokit API switched to nf-core custom API (#37)

v1.5.2

Added

  • CI workflow steps for better compatibility with https://github.com/nektos/act
  • Visual Studio Code debugging configuration
  • Husky pre-commit hooks for linting and formatting
  • Deprecation messages to warn users of upcoming API switch

v1.5.1

Changed

  • API calls are now lazy loaded to avoid making unnecessary calls (#33)

v1.5.0

Added

  • Throttling support to retry failed API calls (#31)

Changed

  • Octokit API calls refactored and separated from install script (#29)

v1.4.0

Changed

  • If fs.renameSync fails (e.g. because source and destination files are on different partitions), try fs.copySync and fs.unlinkSync instead (#14).
  • Fail instead of warn, when `nextflow help`` doesn't work (#23).

Fixed

  • Re-enable npm run test in CI (#15).
  • Fix release version check in unit test (#15).
  • Add helper function for checking the latest releases in the unit tests (#15).

v1.3.0

Changed

  • Action now checks tool cache for installed version before querying Octokit (#5/#10)

v1.2.0

... (truncated)

Changelog

Sourced from nf-core/setup-nextflow's changelog.

Commits

Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

Bumps [nf-core/setup-nextflow](https://github.com/nf-core/setup-nextflow) from 1 to 2.
- [Release notes](https://github.com/nf-core/setup-nextflow/releases)
- [Changelog](https://github.com/nf-core/setup-nextflow/blob/master/CHANGELOG.md)
- [Commits](nf-core/setup-nextflow@v1...v2)

---
updated-dependencies:
- dependency-name: nf-core/setup-nextflow
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code labels Mar 1, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
Projects
None yet
Development

Successfully merging this pull request may close these issues.

0 participants