Added options for mrtrix_track_roi2roi parameters, that allow setting FA threshold, curvature threshold and length threshold #113
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| function [pdb_file, status, results] = mrtrix_track_roi2roi(files, roi1, roi2, seed, mask, mode, n, n_max, bkgrnd, verbose) | ||
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| function [pdb_file, status, results] = mrtrix_track_roi2roi(files, roi1, roi2, seed, mask, mode, n, n_max, bkgrnd, verbose, varargin) | ||
| % ,fiber_length,fa_th,fa_th_init,curv_th, |
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We (Franco and Dora) tested back compatibility. The function can be called the old way without errors. The new parameters are passed in to the function as a varargin input, a series of if statements unpack the parameters. Default parameters are unchanged form previous version of the function.