add booster data

wwsalmon · Feb 12, 2023 · 5fa4c5a · 5fa4c5a
1 parent acafc28
commit 5fa4c5a
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Showing 2 changed files with 109 additions and 13 deletions.
diff --git a/data/primary.json b/data/primary.json
@@ -430,5 +430,101 @@
     "UCL": 84.4,
     "vaccine": "J&J 1st dose",
     "outcome_category": "death"
+  },
+  {
+    "days": 22,
+    "VE": 85.8,
+    "LCL": 82.7,
+    "UCL": 88.3,
+    "vaccine": "First booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 60,
+    "VE": 76.3,
+    "LCL": 73.9,
+    "UCL": 78.6,
+    "vaccine": "First booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 120.5,
+    "VE": 67.3,
+    "LCL": 62,
+    "UCL": 71.9,
+    "vaccine": "First booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 150,
+    "VE": 54.9,
+    "LCL": 35.6,
+    "UCL": 68.4,
+    "vaccine": "First booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 22,
+    "VE": 64.3,
+    "LCL": 50.7,
+    "UCL": 74.2,
+    "vaccine": "Second booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 60,
+    "VE": 51.1,
+    "LCL": 35.5,
+    "UCL": 63,
+    "vaccine": "Second booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 90,
+    "VE": 17.3,
+    "LCL": -45.3,
+    "UCL": 62.6,
+    "vaccine": "Second booster",
+    "outcome_category": "infection"
+  },
+  {
+    "days": 60,
+    "VE": 89,
+    "LCL": 88,
+    "UCL": 90,
+    "vaccine": "First booster",
+    "outcome_category": "severe"
+  },
+  {
+    "days": 90,
+    "VE": 86,
+    "LCL": 85,
+    "UCL": 87,
+    "vaccine": "First booster",
+    "outcome_category": "severe"
+  },
+  {
+    "days": 150,
+    "VE": 66,
+    "LCL": 63,
+    "UCL": 68,
+    "vaccine": "First booster",
+    "outcome_category": "severe"
+  },
+  {
+    "days": 210,
+    "VE": 41,
+    "LCL": 35,
+    "UCL": 47,
+    "vaccine": "First booster",
+    "outcome_category": "severe"
+  },
+  {
+    "days": 240,
+    "VE": 31,
+    "LCL": 17,
+    "UCL": 43,
+    "vaccine": "First booster",
+    "outcome_category": "severe"
   }
 ]
diff --git a/saatvik_modelling/booster_data.csv b/saatvik_modelling/booster_data.csv
@@ -1,13 +1,13 @@
-days,VE,LCL,UCL,vaccine,booster_dose,outcome_category
-22,85.8,82.7,88.3,Moderna,1,infection
-60,76.3,73.9,78.6,Moderna,1,infection
-120.5,67.3,62,71.9,Moderna,1,infection
-150,54.9,35.6,68.4,Moderna,1,infection
-22,64.3,50.7,74.2,Moderna,2,infection
-60,51.1,35.5,63,Moderna,2,infection
-90,17.3,-45.3,62.6,Moderna,2,infection
-60,89,88,90,Moderna,1,severe
-90,86,85,87,Moderna,1,severe
-150,66,63,68,Moderna,1,severe
-210,41,35,47,Moderna,1,severe
-240,31,17,43,Moderna,1,severe
+days,VE,LCL,UCL,vaccine,outcome_category
+22,85.8,82.7,88.3,First booster,infection
+60,76.3,73.9,78.6,First booster,infection
+120.5,67.3,62,71.9,First booster,infection
+150,54.9,35.6,68.4,First booster,infection
+22,64.3,50.7,74.2,Second booster,infection
+60,51.1,35.5,63,Second booster,infection
+90,17.3,-45.3,62.6,Second booster,infection
+60,89,88,90,First booster,severe
+90,86,85,87,First booster,severe
+150,66,63,68,First booster,severe
+210,41,35,47,First booster,severe
+240,31,17,43,First booster,severe