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Merge pull request #37 from RonaldVisser/patch-1
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Updating and adding new records.
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zackbatist authored Jul 23, 2024
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14 changes: 13 additions & 1 deletion README.md
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* by: SantaFeInstitute
* links: [GitHub](https://github.com/SantaFeInstitute/ABMA)
* tags: [Educational resources and practical guides] and [Simulation]


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* **ABMArchaeologists**: code repository, tutorials and website for Agent-Based Modeling for Archaeologist.
* by Doug Rocks-Macqueen, Laura van der Knaap, Annemarie Jutte, , Ronald Visser, Jeroen Linssen, Tom Brughmans, Iza Romanowska, Kenneth Aitchison, Karsten Lambers,
* links: [GitHub](https://github.com/ABMArchaeologists) [Website](https://abmarchaeologists.github.io/ABMA_website/)
* tags: [Educational resources and practical guides] and [Simulation]

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* **ADMUR**: Tools to directly model underlying population dynamics using chronological datasets (radiocarbon and other) with a variety of models, including Continuous Piecewise Linear (CPL) model framework, and model comparison framework using BIC. Package also calibrates 14C samples, and generates Summed Probability Distributions (SPD). CPL modelling directly estimates the most likely population trajectory given a dataset, using SPD simulation analysis to generate a Goodness-of-fit test for the best selected model.
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* by: renderpci
* links: [GitHub](https://github.com/renderpci/dedalo)
* tags: [Data management]

* **dendroNetwork**: The R-package to make network analyses of dendrochronological data accessible for researchers. DendroNetwork enables researchers to easily construct a network of dendrochronological series based on the similarity and find patterns of matching tree-ring material. The detection of patterns is assisted by the easy application of community detection and subsequent (automated) visualization using Cytoscape, enabling dendrochronologists and other researchers to apply networks analyses to understand patterns of similarity between tree-ring series.
* by: Ronald Visser
* links: [GitHub](https://github.com/ropensci/dendroNetwork/)
* tags: [Dendrochronology] and [Chronological modelling]

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7 changes: 4 additions & 3 deletions open-archaeo.csv
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Expand Up @@ -218,7 +218,7 @@ Ceramic_Dashboard,Dashboard showing ceramic EDA and interaction network construc
missing,You have a sequence of numbered items and want to check if any are missing.,,,,,,,,,,,https://codeberg.org/steko/missing,,,,steko,,,,,,Scripts,Python,Bits and bobs,,,,,,https://archive.org/details/codeberg.org-steko-missing_-_2020-02-10_10-18-09
soiltexture,"The Soil Texture Wizard is a set of R functions designed to produce texture triangles (also called texture plots, texture diagrams, texture ternary plots), classify and transform soil textures data",https://github.com/julienmoeys/soiltexture,,,,,,,,https://cran.r-project.org/web/packages/soiltexture/index.html,,,,,,julienmoeys,,,,,,Packages and libraries,R,Bits and bobs,,,,,,https://archive.org/details/github.com-julienmoeys-soiltexture_-_2020-03-09_15-35-09
sparch,A set of extra utilities that extend the functionlaity provided by core packages for spatial data management and analysis in R.,https://github.com/ahb108/sparch,,,,,,,,,,,,,,ahb108,,,,,,Packages and libraries,R,Bits and bobs,,,,,,https://archive.org/details/github.com-ahb108-sparch_-_2021-02-01_09-55-02
MtreeRing,A tool for automatically measuring tree-ring width using image processing techniques.,https://github.com/ropensci/MtreeRing,,,,,,,,,,,https://ropensci.github.io/MtreeRing/,,,ropensci,,,,,,Packages and libraries,R,Bits and bobs,Dendrochronology,,,,,https://archive.org/details/github.com-ropensci-MtreeRing_-_2020-06-09_18-41-07
MtreeRing,A tool for automatically measuring tree-ring width using image processing techniques.,https://github.com/ropensci/MtreeRing,,,,,,,,,,,https://ropensci.github.io/MtreeRing/,,,ropensci,,,,,,Packages and libraries,R,Bits and bobs,,,,,,https://archive.org/details/github.com-ropensci-MtreeRing_-_2020-06-09_18-41-07
qrcode-storage,"Scripts to create QR-Code images for storage boxes. Each box has an associated web page describing its content, and the QR-Code serves as a short-link from the physical object to the web page.",,,,,,,,,,,https://codeberg.org/steko/qrcode-storage,,,,steko,,,,,,Scripts,Python,Bits and bobs,,,,,,https://archive.org/details/codeberg.org-steko-qrcode-storage_-_2020-06-22_14-11-12
GmAMisc,"A collection of functions that built in different points in time. The functions' aim spans from univariate outlier detection, to permutation t test, permutation chi-square test, calculation of Brainerd-Robinson similarity coefficient, validation of logistic regression models, point pattern analysis, and more.",https://github.com/gianmarcoalberti/GmAMisc,,,,,,,,,,,,,,gianmarcoalberti,,,,,,Packages and libraries,R,Bits and bobs,,,,,,https://archive.org/details/github.com-gianmarcoalberti-GmAMisc_-_2018-07-10_14-35-11
QGIS-scripts,Some scripts that could be useful for QGIS users.,https://github.com/zoran-cuckovic/QGIS-scripts,,,,,,,,,,,,,,zoran-cuckovic,,,,,,Packages and libraries,QGIS,Bits and bobs,,,,,,https://archive.org/details/github.com-zoran-cuckovic-QGIS-scripts_-_2018-07-21_22-11-13
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IsoDataVis,"Data visualization guidelines for stable isotopes graphs, with examples",https://github.com/stantis/IsoDataVis,,,,,,,,,,,https://stantis.github.io/IsoDataVis/,,,stantis,,,,,,Guides,,Stable isotope analysis,Educational resources and practical guides,Diagrams and visualizations,,,,
Isotope-Visualisation,Resources relevant to visualisation of isotopic results,https://github.com/EstherPlomp/Isotope-Visualisation,,,,,,,,,,,,,,EstherPlomp,,,,,,Lists and datasets,,Stable isotope analysis,Diagrams and visualizations,Educational resources and practical guides,,,,
archaeological-SNA-R-demo,A quick demo of archaeological social network analysis in R,https://github.com/deanthebox/archaeological-SNA-R-demo,,,,,,,,,,,,,,deanthebox,,,,,,Guides,,Educational resources and practical guides,Network analysis,,,,,
ABMA,code repository and website for Agent-Based Modeling for Archaeology.,https://github.com/SantaFeInstitute/ABMA,,,,,,,,,,,,,,SantaFeInstitute,,,,,,Guides,,Educational resources and practical guides,Simulation,,,,,
Analysing Stable Isotope Data,"Tutorial on how to visualise, analyse and interpret stable isotope data",,,,,,,,,,,,https://sites.google.com/view/brianhayden/teaching/analyzing-stable-isotope-data,,,Brian Hayden,,,,,,Guides,,Educational resources and practical guides,Stable isotope analysis,Diagrams and visualizations,,,,
ABMA,Code repository and website for Agent-Based Modeling for Archaeology.,https://github.com/SantaFeInstitute/ABMA,,,,,,,,,,,https://abmarchaeologists.github.io/ABMA_website/,,,SantaFeInstitute,,,,,,Guides,,Educational resources and practical guides,Simulation,,,,,
Analysing Stable Isotope Data,"Tutorial on how to visualise, analyse and interpret stable isotope data",,,,,,,,,,,,https://sites.google.com/view/brianhayden/teaching/analyzing-stable-isotope-data,,,Brian Hayden,,,,,,Guides,,Educational resources and practical guides,Stable isotope analysis,Diagrams and visualizations,,,"Need to add more author columns and revise the way these columns are parsed. Additional authors not currently represented include: Doug Rocks-Macqueen, Laura van der Knaap, Annemarie Jutte, , Ronald Visser, Jeroen Linssen, Tom Brughmans, Iza Romanowska, Kenneth Aitchison, Karsten Lambers.",
Plotting Dental Inventory with ggplot2,tutorial on an intuitive way to visualise a dental inventory in a sample,,,,,,,,,,,,https://bjorn.rbind.io/post/dental-inv-plot/,,,bbartholdy,,,,,,Guides,,Educational resources and practical guides,Stable isotope analysis,Diagrams and visualizations,,,,
IsoMapNL,Data and script to generate a map of the Netherlands for isotopic analyses,https://github.com/EstherPlomp/IsoMapNL,,,,,,,,,,,,,,EstherPlomp,,,,,,Guides,,Educational resources and practical guides,Stable isotope analysis,Diagrams and visualizations,,,,
rock-art-transfer-learning,Reconstructing rock art chronology with transfer learning,https://github.com/keeeal/rock-art-transfer-learning,,,,,,,,,,,,,,keeeal,,,,,,Packages and libraries,Python,Shape recognition,Chronological modelling,Iconography,,,,
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WeedEco,Classification of unknown cases (e.g. archaeobotanical data or other modern weed survey data) using linear discriminant analysis to understand farming regimes.,https://github.com/WeedEco/WeedEco,,,,,,,,,,,,,,WeedEco,,,,,,Packages and libraries,R,Palaeobotany,,,,,,
CropPro,"Data organisation, classification and visualisation of archaeobotanical data to understand crop processing stage.",https://github.com/CropPro-package/CropPro,,,,,,,,,,,,,,CropPro-package,,,,,,Packages and libraries,R,Palaeobotany,Data management,,,,,
ruby-radiocarbon,Ruby gem for fast radiocarbon calibration.,https://github.com/joeroe/ruby-radiocarbon,,,,,,,,,,,,,,joeroe,,,,,,Packages and libraries,Ruby,"Radiocarbon dating, calibration and sequencing",,,,,,
dendroNetwork,Enables researchers to easily construct a network of dendrochronological series based on the similarity and find patterns of matching tree-ring material.,https://github.com/ropensci/dendroNetwork/,,,,,,,,https://cran.r-project.org/web/packages/dendroNetwork/index.html,,,https://docs.ropensci.org/dendroNetwork/,,,ropensci,RonaldVisser,,,,,Packages and libraries,R,Dendrochronology,Chronological modelling,,,,,

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