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started resfinderfg manual curation
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Vedanth-Ramji committed Feb 23, 2024
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56 changes: 56 additions & 0 deletions argnorm/data/manual_curation/resfinder_fg_manual_curation.tsv
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Original ID ARO Replacement
3 Aminoglycoside
14 Beta-lactamase|KJ692949.1|grassland 3002489
26 16S
48 Beta-lactamase|GQ343015.1|human 3006880
51 Beta-lactamase|KJ694531.1|grassland 3002489
52 Streptomycin
54 Vancomycin
59 Pentapeptide 3002724
62 Beta-lactamase|KJ695330.1|Agricultural 3002521
70 putative
71 Vancomycin/teicoplanin
73 Beta-lactamase|KJ695915.1|Agricultural 3002521
74 Ribosomal
76 Beta-lactamase|KF033132.1|river 3004793
79 Methicillin 3006902
87 Extended-spectrum
88 Metallo-beta-lactamase
103 Beta-lactamase|KJ694733.1|grassland 3006931
104 ABC-F
108 Beta-lactamase|KC520484.1|Active 3002482
109 Carbapenem-hydrolyzing
117 Bifunctional
145 Beta-lactamase|KJ695458.1|Agricultural 3002484
149 Beta-lactamase|GQ343055.1|human 3006876
159 Dihydropteroate
168 2''-aminoglycoside
172 Beta-lactamase|KJ694180.1|grassland 3002484
175 Beta-lactamase|MW234456.1|duck 3005584
194 Beta-lactamase|KJ693456.1|grassland 3002120
197 Tetracycline
198 tetracycline
202 SPbeta
244 chloramphenicol
246 Beta-lactamase|GQ343018.1|human 3002117
255 Dihydrofolate
259 Beta-lactamase|KJ695366.1|Agricultural 3002482
261 Beta-lactamase
265 Beta-lactamase|KJ694385.1|grassland 3004856
270 Gentamicin
281 Beta-lactamase|KJ692663.1|grassland 3002520
288 D-alanine--D-alanine
334 Beta-lactamase|KJ694078.1|grassland 3006946
336 Beta-lactamase|KJ694108.1|grassland 3004856
337 Beta-lactamase|KJ696348.1|Agricultural 3006832
346 Beta-lactamase|KM113767.1|cow 3004359
350 Beta-lactamase|KJ692935.1|grassland 3002489
352 Beta-lactamase|GQ343073.1|human 3005198
355 Beta-lactamase|KC520483.1|Active 3006713
358 Beta-lactamase|KJ693194.1|grassland 3002120
359 Beta-lactamase|KJ693015.1|grassland 3002484
361 Chloramphenicol
362 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine
374 Beta-lactamase|FN640467.1|loamy 3002515
375 Beta-lactamase|KJ692539.1|grassland 3002489
378 Beta-lactamase|GQ343009.1|human 3002059
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