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Update processing.py replace_dic ß : b #35

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Update processing.py replace_dic ß : b #35

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Merge pull request #12 from BojarLab/dev
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Merge pull request #34 from BojarLab/dev
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Update processing.py deplace_dic ß : b
mattias-erhardsson Feb 21, 2024
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2 changes: 1 addition & 1 deletion glycowork/motif/processing.py
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Original file line number Diff line number Diff line change
Expand Up @@ -826,7 +826,7 @@ def canonicalize_iupac(glycan):
replace_dic = {'Nac': 'NAc', 'AC': 'Ac', 'Nc': 'NAc', 'NeuAc': 'Neu5Ac', 'NeuNAc': 'Neu5Ac', 'NeuGc': 'Neu5Gc',
'\u03B1': 'a', '\u03B2': 'b', 'N(Gc)': 'NGc', 'GL': 'Gl', 'GaN': 'GalN', '(9Ac)': '9Ac',
'KDN': 'Kdn', 'OSO3': 'S', '-O-Su-': 'S', '(S)': 'S', 'H2PO3': 'P', '(P)': 'P',
'–': '-', ' ': '', ',': '-', 'α': 'a', 'β': 'b', '.': '', '((': '(', '))': ')', '→': '-',
'–': '-', ' ': '', ',': '-', 'α': 'a', 'β': 'b', 'ß': 'b', '.': '', '((': '(', '))': ')', '→': '-',
'Glcp': 'Glc', 'Galp': 'Gal', 'Manp': 'Man', 'Fucp': 'Fuc', 'Neup': 'Neu', 'a?': 'a1'}
glycan = multireplace(glycan, replace_dic)
# Trim linkers
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