adding travis config

CostaLab · Aug 31, 2018 · 7d3ac16 · 7d3ac16
1 parent 1ee396e
commit 7d3ac16
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Showing 2 changed files with 22 additions and 10 deletions.
diff --git a/.travis.yml b/.travis.yml
@@ -0,0 +1,12 @@
+language: python
+python:
+  - "2.7"
+  # PyPy versions
+  - "pypy2.7"
+# command to install dependencies
+install:
+  - pip install -r requirements.txt
+  - pip install .
+# command to run tests
+script:
+  - python -m unittest discover unittest/ -p "*" -v
diff --git a/unittest/test_AnnotationSet.py b/unittest/test_AnnotationSet.py
@@ -11,16 +11,16 @@
 # print("\t"+gd.get_annotation())
 # print("\tloading GenomeData... succeeds")
 
-genome = "hg38"
-print("Checking " + genome)
-annot = AnnotationSet(genome, filter_havana=False, protein_coding=True, known_only=False)
-# annot = AnnotationSet(genome,filter_havana=True,protein_coding=True,known_only=True)
-print("\tloading AnnotationSet... succeeds")
-promoters = annot.get_promoters()
-print("\tPromoters " + str(len(promoters)))
-gd = GenomeData(organism=genome)
-print("\t" + gd.get_annotation())
-print("\tloading GenomeData... succeeds")
+# genome = "hg38"
+# print("Checking " + genome)
+# annot = AnnotationSet(genome, filter_havana=False, protein_coding=True, known_only=False)
+# # annot = AnnotationSet(genome,filter_havana=True,protein_coding=True,known_only=True)
+# print("\tloading AnnotationSet... succeeds")
+# promoters = annot.get_promoters()
+# print("\tPromoters " + str(len(promoters)))
+# gd = GenomeData(organism=genome)
+# print("\t" + gd.get_annotation())
+# print("\tloading GenomeData... succeeds")
 
 # genome = "mm9"
 # print("Checking " + genome)