Updates to support Spack

CHANGELOG.md

@@ -10,6 +10,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Changed
 
+- Updates to CMake to support Spack
 - Moved CircleCI to use circleci-tools orb
 
 ### Removed

DNA_GridComp/CMakeLists.txt

@@ -4,9 +4,8 @@ set (srcs
   DNA_GridCompMod.F90
   )
 
-esma_add_library (${this} SRCS ${srcs} DEPENDENCIES MAPL)
+esma_add_library (${this} SRCS ${srcs} DEPENDENCIES MAPL esmf NetCDF::NetCDF_Fortran)
 target_compile_definitions (${this} PRIVATE MAPL_MODE GEOS5)
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
 
 set (resource_files
    DNA_ExtData.rc

GAAS_GridComp/CMakeLists.txt

@@ -7,8 +7,7 @@ set (srcs
   )
 
 
-esma_add_library (${this} SRCS ${srcs} DEPENDENCIES MAPL Chem_Base Chem_Shared GMAO_mpeu FVdycoreCubed_GridComp)
-target_include_directories (${this} PUBLIC ${INC_NETCDF})
+esma_add_library (${this} SRCS ${srcs} DEPENDENCIES MAPL Chem_Base Chem_Shared GMAO_mpeu FVdycoreCubed_GridComp NetCDF::NetCDF_Fortran)
 
 esma_generate_gocart_code (${this} -F)
 

GEOSCHEMchem_GridComp/CMakeLists.txt

@@ -76,13 +76,9 @@ endif ()
 esma_add_library (${this}
    SRCS ${srcs}
    DEPENDENCIES MAPL MAPL_cfio_r4 Chem_Base Chem_Shared HEMCO
+                OpenMP::OpenMP_Fortran esmf NetCDF::NetCDF_Fortran
    )
 
-# Enable OpenMP
-target_link_libraries(${this} PRIVATE OpenMP::OpenMP_Fortran)
-
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
-
 target_compile_definitions(${this} PRIVATE
    ESMF_ UCX EXTERNAL_GRID EXTERNAL_FORCING USE_REAL8 MODEL_GEOS)
 

GEOSachem_GridComp/CMakeLists.txt

@@ -16,7 +16,7 @@ set (srcs
   ${kpp_gas_dir}/kpp_achem_gas_Monitor.f90
   ${kpp_gas_dir}/kpp_achem_gas_Util.f90
   ${kpp_gas_dir}/kpp_achem_gas_LinearAlgebra.f90
-  ${kpp_gas_dir}/kpp_achem_gas_Integrator.f90  
+  ${kpp_gas_dir}/kpp_achem_gas_Integrator.f90
   GACL_ConstantsMod.F90
   GACL_EmissionsMod.F90
   GACL_ReactionRatesMod.F90
@@ -27,11 +27,10 @@ set (srcs
 esma_add_library (
   ${this}
   SRCS ${srcs}
-  DEPENDENCIES Chem_Shared MAPL GMAO_mpeu
+  DEPENDENCIES Chem_Shared MAPL GMAO_mpeu esmf NetCDF::NetCDF_Fortran
   )
 target_compile_definitions (${this} PRIVATE MAPL_MODE GEOS5)
 set_target_properties (${this} PROPERTIES COMPILE_FLAGS ${PP})
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
 
 new_esma_generate_automatic_code (
   ${this} GEOSachem_Registry.rc

GEOSpchem_GridComp/CMakeLists.txt

@@ -2,5 +2,4 @@ esma_set_this ()
 
 esma_add_library (${this}
   SRCS GEOS_PChemGridComp.F90
-  DEPENDENCIES MAPL MAPL_cfio_r4 Chem_Base)
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
+  DEPENDENCIES MAPL MAPL_cfio_r4 Chem_Base esmf NetCDF::NetCDF_Fortran)

HEMCO_GridComp/CMakeLists.txt

@@ -7,10 +7,9 @@ set (srcs
 esma_add_library (
   ${this}
   SRCS ${srcs}
-  DEPENDENCIES Chem_Shared MAPL HEMCO
+  DEPENDENCIES Chem_Shared MAPL HEMCO esmf NetCDF::NetCDF_Fortran
   )
 target_compile_definitions (${this} PRIVATE ESMF_ DEVEL GEOS_FP)
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
 
 set (acg_headers
   HEMCO_InternalSpec___.h HEMCO_DeclarePointer___.h HEMCO_GetPointer___.h
@@ -26,7 +25,7 @@ add_custom_command (
   OUTPUT ${acg_headers}
   COMMAND ${generator} ${acg_flags} -v -F ${CMAKE_CURRENT_SOURCE_DIR}/HEMCO_Registry.rc
   WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
-  MAIN_DEPENDENCY HEMCO_Registry.rc 
+  MAIN_DEPENDENCY HEMCO_Registry.rc
 #  DEPENDS ${include_MAPL_Base}/mapl_acg.pl
   COMMENT "Generating automated code for HEMCO"
   )

MAMchem_GridComp/CMakeLists.txt

@@ -54,9 +54,8 @@ set (srcs
   )
 
 
-set (dependencies MAPL Chem_Shared GMAO_mpeu)
+set (dependencies MAPL Chem_Shared GMAO_mpeu esmf NetCDF::NetCDF_Fortran)
 esma_add_library (${this} SRCS ${srcs} DEPENDENCIES ${dependencies} SUBDIRS optics)
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
 target_compile_definitions (${this} PRIVATE GEOS5 MODAL_AERO MODAL_AERO_7MODE GEOS5_PORT)
 
 esma_generate_gocart_code (${this} -F)

Shared/Chem_Base/CMakeLists.txt

@@ -11,8 +11,7 @@ set (srcs
   Chem_AodMod.F90
   Chem_SimpleBundleMod.F90
   )
-esma_add_library(${this} SRCS ${srcs} DEPENDENCIES GMAO_mpeu MAPL GMAO_gfio_r4)
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
+esma_add_library(${this} SRCS ${srcs} DEPENDENCIES GMAO_mpeu MAPL GMAO_gfio_r4 esmf NetCDF::NetCDF_Fortran)
 target_compile_definitions (${this} PRIVATE GEOS5)
 
 ecbuild_add_executable(TARGET gogo.x SOURCES gogo.F90 LIBS ${this})
@@ -24,9 +23,9 @@ if (USE_F2PY)
    if (F2PY2_FOUND)
       add_f2py2_module(MieObs_ SOURCES MieObs_py.F90
          DESTINATION lib/Python2
-         LIBRARIES Chem_Base MAPL GMAO_mpeu ${NETCDF_LIBRARIES} ${ESMF_LIBRARY}
-         INCLUDEDIRS ${CMAKE_CURRENT_BINARY_DIR} ${CMAKE_BINARY_DIR}/lib ${BASEDIR}/lib ${include_${this}} ${INC_NETCDF}
-         USE_MPI
+         LIBRARIES Chem_Base MAPL GMAO_mpeu ${ESMF_LIBRARY}
+         INCLUDEDIRS ${CMAKE_CURRENT_BINARY_DIR} ${CMAKE_BINARY_DIR}/lib ${include_${this}}
+         USE_MPI USE_NETCDF
          )
       add_dependencies(MieObs_ ${this})
    endif ()
@@ -38,9 +37,7 @@ foreach (exe Chem_Aod.x Chem_Aod3d.x ctl_crst.x Chem_BundleToG5rs.x reff_calcula
   ecbuild_add_executable (
     TARGET ${exe}
     SOURCES ${basename}.F90
-    LIBS ${this} ${OpenMP_Fortran_LIBRARIES})
-  # Do not know how to propagate the flags for OpenMP link step from lower libraries.
-  set_target_properties(${exe} PROPERTIES LINK_FLAGS "${OpenMP_Fortran_FLAGS}")
+    LIBS ${this} OpenMP::OpenMP_Fortran)
 endforeach ()
 
 # Copy RC files to build tree

Shared/Chem_Shared/CMakeLists.txt

@@ -32,10 +32,9 @@ else ()
   list (APPEND srcs Chem_UtilMod_geos4.F90)
 endif ()
 
-esma_add_library(${this} 
-   SRCS ${srcs} 
-   DEPENDENCIES GMAO_mpeu MAPL Chem_Base GEOS_Shared GMAO_hermes)
-target_include_directories(${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
+esma_add_library(${this}
+   SRCS ${srcs}
+   DEPENDENCIES GMAO_mpeu MAPL Chem_Base GEOS_Shared GMAO_hermes esmf NetCDF::NetCDF_Fortran)
 #add_definitions(-DDEBUG)
 add_definitions(-DSPMD -DFVCHEM)
 
@@ -48,5 +47,5 @@ install(
   PROGRAMS bundleParser.py
   DESTINATION bin
 )
-  
-  
+
+

Shared/HEMCO/CMakeLists.txt

@@ -44,10 +44,8 @@ list (REMOVE_ITEM srcs
 
 esma_add_library (${this}
    SRCS ${srcs}
-   DEPENDENCIES MAPL
+   DEPENDENCIES MAPL esmf NetCDF::NetCDF_Fortran
    )
 
-target_include_directories (${this} PUBLIC ${INC_ESMF} ${INC_NETCDF})
-
 target_compile_definitions (${this} PRIVATE ESMF_ USE_REAL8 MODEL_GEOS)
 set_target_properties (${this} PROPERTIES Fortran_MODULE_DIRECTORY ${include_${this}})

StratChem_GridComp/CMakeLists.txt

@@ -72,9 +72,8 @@ include_directories (${include_Chem_Shared})
 include_directories (${CMAKE_CURRENT_BINARY_DIR})
 include_directories (${include_GMAO_mpeu})
 
-set (dependencies Chem_Shared MAPL MAPL_cfio_r4 GMAO_mpeu)
+set (dependencies Chem_Shared MAPL MAPL_cfio_r4 GMAO_mpeu NetCDF::NetCDF_Fortran)
 esma_add_library (${this} SRCS ${srcs} DEPENDENCIES ${dependencies})
-target_include_directories (${this} PUBLIC ${INC_NETCDF})
 
 if (STRATCHEM_REDUCED_MECHANISM)
    target_compile_definitions(${this} PRIVATE REDUCED)