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Commits on Dec 15, 2021

• prep 1.2.9 release (#3590)

  naumenko-sa

  authoredDec 15, 2021
  a2cbdd1

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Commits on Jun 9, 2021

• Update setup.py

  naumenko-sa

  authoredJun 9, 2021
  14d531d

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Commits on Apr 14, 2021

• update versions to 1.2.8 (#3468)

  naumenko-sa

  authoredApr 14, 2021
  e1192f4

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Commits on Feb 23, 2021

• Prep for 1.2.7 release.

  roryk

  committedFeb 23, 2021
  c862626

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Commits on Feb 5, 2021

• 1.2.6 release.

  roryk

  committedFeb 5, 2021
  c0db51a

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Commits on Jan 9, 2021

• 1.2.5 release.

  roryk

  committedJan 9, 2021
  ec84064

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Commits on Sep 21, 2020

• Increment version for 1.2.4 release.

  roryk

  committedSep 21, 2020
  aff0de6

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Commits on Apr 7, 2020

• 1.2.3 release.

  roryk

  committedApr 7, 2020
  f0d6a88

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Commits on Apr 5, 2020

• Cut 1.2.2 release.

  roryk

  committedApr 5, 2020
  4b88065

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Commits on Mar 25, 2020

• 1.2.1 release.

  roryk

  committedMar 25, 2020
  48139c4

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Commits on Feb 26, 2020

• Update Python package setup (#3111)

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  hackdna

  authoredFeb 26, 2020
  dd1c87b

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Commits on Feb 7, 2020

• v1.2.0 release.

  roryk

  committedFeb 7, 2020
  9289bdf

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Commits on Dec 11, 2019

• bump version to 1.2.0a.

  roryk

  committedDec 11, 2019
  d8dcdd8

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Commits on Nov 5, 2019

• Bump version to 1.1.9a.

  roryk

  committedNov 5, 2019
  e9800a4

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Commits on Oct 29, 2019

• Prep for 1.1.8 release.

  roryk

  committedOct 29, 2019
  42ab5a9

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Commits on Oct 18, 2019

• Bump version to 1.1.8a.

  roryk

  committedOct 18, 2019
  1d3ee6c

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Commits on Oct 11, 2019

• Prep for 1.1.7 release, fixing ChIP-seq pipeline.

  roryk

  committedOct 11, 2019
  38223f8

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Commits on Oct 10, 2019

• Prep for 1.1.6 release.

  roryk

  committedOct 10, 2019
  f150184

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Commits on Apr 13, 2019

• ensemble: avoid JAVA_HOME overriding internal java #2778

  chapmanb

  committedApr 13, 2019
  131cef1

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Commits on Apr 12, 2019

• v1.1.5 release

  chapmanb

  committedApr 12, 2019
  14869f2

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Commits on Apr 4, 2019

• Python 3 compatibility: provide apply for ipython tasks

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  chapmanb

  committedApr 4, 2019
  48d38b1

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Commits on Apr 3, 2019

• v1.1.4 release

  chapmanb

  committedApr 3, 2019
  08fdf3b

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Commits on Jan 31, 2019

• tumor-only germline prioritization: filter based on INFO/EPR

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  chapmanb

  committedJan 31, 2019
  e9dfd8d

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Commits on Jan 29, 2019

• v1.1.3 release

  chapmanb

  committedJan 29, 2019
  347f133

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Commits on Dec 13, 2018

• CNV: support background inputs for CNVkit, GATK4 CNV and seq2c

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  chapmanb

  committedDec 13, 2018
  be17357

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Commits on Dec 12, 2018

• v1.1.2 release

  chapmanb

  committedDec 12, 2018
  0c2e181

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Commits on Nov 7, 2018

• PURPLE: input heterozygote variants from panel of normals

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  chapmanb

  committedNov 7, 2018
  8d40ce7

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Commits on Nov 6, 2018

• v1.1.1 release

  chapmanb

  committedNov 6, 2018
  ad3da20

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Commits on Jul 11, 2018

• CWL: support for variant inputs to SV and het calling

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  chapmanb

  committedJul 11, 2018
  ed98597

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• v1.1.0 release

  chapmanb

  committedJul 11, 2018
  612d9a5

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Commits on Apr 10, 2018

• variant base recalibration: apply GATK resource requests

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  chapmanb

  committedApr 10, 2018
  bd03e25

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• v1.0.9 release

  chapmanb

  committedApr 10, 2018
  bdd2466

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Commits on Mar 9, 2018

• Docs: point to bcbio organization repository

  chapmanb

  committedMar 9, 2018
  112d255

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Commits on Feb 6, 2018

• BAM clean: bai indices for extra contig removal

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  chapmanb

  committedFeb 6, 2018
  cdd4bb1

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Commits on Feb 5, 2018

• v1.0.8 release

  chapmanb

  committedFeb 5, 2018
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