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name: UTA Update | ||
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on: | ||
workflow_dispatch: | ||
inputs: | ||
genome-build: | ||
description: Genome build | ||
type: choice | ||
options: | ||
- GRCh37 | ||
- GRCh38 | ||
default: GRCh38 | ||
run-fetch-data: | ||
description: Fetch data with mirrors-ncbi | ||
type: boolean | ||
default: false | ||
run-build-seqrepo: | ||
description: Build SeqRepo | ||
type: boolean | ||
default: false | ||
run-push-seqrepo: | ||
description: Push SeqRepo to download area | ||
type: boolean | ||
default: false | ||
run-prepare-loading: | ||
description: Prepare files for loading | ||
type: boolean | ||
default: false | ||
run-create-load-db: | ||
description: Create loading database | ||
type: boolean | ||
default: false | ||
run-load-data: | ||
description: Load data | ||
type: boolean | ||
default: false | ||
run-custom-transcripts: | ||
description: Add custom transcript alignments | ||
type: boolean | ||
default: false | ||
run-rename-db: | ||
description: Rename database | ||
type: boolean | ||
default: false | ||
run-create-update-ncbi-schema: | ||
description: Create & update ncbi schema | ||
type: boolean | ||
default: false | ||
run-dumb-new-db: | ||
description: Dumb new database | ||
type: boolean | ||
default: false | ||
run-deploy-db-for-testing: | ||
description: Deploy new database for testing | ||
type: boolean | ||
default: false | ||
run-test-build: | ||
description: Test build | ||
type: boolean | ||
default: false | ||
run-deploy-to-production: | ||
description: Deploy to production | ||
type: boolean | ||
default: false | ||
|
||
jobs: | ||
summarize-inputs: | ||
name: Workflow inputs | ||
runs-on: ubuntu-latest | ||
steps: | ||
- name: Dump GHA inputs to summary page | ||
uses: actions/github-script@v6 | ||
env: | ||
INPUTS_JSON: ${{ toJson(inputs) }} | ||
with: | ||
script: | | ||
await core.summary | ||
.addHeading('Inputs') | ||
.addCodeBlock(JSON.stringify(JSON.parse(process.env.INPUTS_JSON), null, 2), 'json') | ||
.write() | ||