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DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. potion potion Public

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 488 51

  2. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 113 44

  3. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 44 1

  4. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 27 13

  5. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 26 2

  6. snakemake_UmetaFlow snakemake_UmetaFlow Public

    Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake

    Python 24 7

Repositories

Showing 10 of 120 repositories
  • biosustain/pankb_data_prep’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 27, 2024
  • Alleleome Public

    Tools to generate core- and panalleleomes.

    biosustain/Alleleome’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 27, 2024
  • dsp_nextflow_training Public

    Hands-on Nextflow training materials and information

    biosustain/dsp_nextflow_training’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 25, 2024
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Oct 25, 2024
  • git_training_henry_recording Public

    Demo repo for git and GitHub live demo recording

    biosustain/git_training_henry_recording’s past year of commit activity
    Python 0 0 0 0 Updated Oct 24, 2024
  • git-tutorial Public Forked from RasmussenLab/git-tutorial

    VS Code on Binder

    biosustain/git-tutorial’s past year of commit activity
    Python 1 BSD-3-Clause 64 0 0 Updated Oct 23, 2024
  • pankb_db Public
    biosustain/pankb_db’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 21, 2024
  • bgcflow Public Forked from pascalaldo/bgcflow

    Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)

    biosustain/bgcflow’s past year of commit activity
    Python 0 MIT 9 0 0 Updated Oct 16, 2024
  • pankb_llm Public

    An LLM-based pangenomics chatbot integrated into the PanKB website.

    biosustain/pankb_llm’s past year of commit activity
    Python 0 0 0 0 Updated Oct 16, 2024
  • dsp_workshop_datavizR Public

    Introduction to Data Visualization: Theory and practice using R

    biosustain/dsp_workshop_datavizR’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 4, 2024

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