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What to include in the parameters file of the current form of the model
This page breaks down what is included in the model parameters file in the form currently present in the master branch. Last updated 12/06/2024
dataDir: - Just a link to the folder where the rest of the data files are contained
population_filename: - The population census file, must have the following columns: person_id, age, sex, household_id, district_id, economic_id, economic_location (although this isn't used, need to change), school_goer
district_transition_LOCKDOWN_filename: - The OD-matrix of population mobility during a lockdown setting district_transition_PRELOCKDOWN_filename: - The OD-matrix of population mobility during a outside of a lockdown setting district_leaving_filename: - Due to be removed to not being a useful addition to the model
economic_status_weekday_movement_prob_filename: A file with probabilities of each occupation leaving the house on weekdays (DO WE NEED THIS?) economic_status_otherday_movement_prob_filename: A file with probabilities of each occupation leaving the house during weekends(DO WE NEED THIS?) economic_status_num_daily_interacts_filename: A file with the number of daily interactions associated with each occupation (Due for removal) econ_interaction_distrib_filename: Currently unused, due for deletion
line_list_filename: A list of districts and number of cases where we will first seed the infections in the simulation infection_transition_params_filename: Age based parameters which we use to determine transitions between disease states lockdown_changeList_filename: A file where we can triggers a lockdown to occur on a specific date (probably due for deletion)
all_cause_mortality_filename: A file which handles the age-dependent rate at which people pass away from causes other than COVID birth_rate_filename: A file which handles the age-dependent rate at which women give birth
testDataFilename: A file containing the number of tests administered to the population testLocationFilename: A file which lists the areas where we want to administer tests