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25 Open 28 Closed
25 Open 28 Closed
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Issues list

Integrate pip-audit in the CI workflows enhancement New feature or request
#143 opened Jan 16, 2025 by jmfernandez
1
@jmfernandez
1
Explore integration of bwrap for enhanced protections enhancement New feature or request
#142 opened Dec 19, 2024 by jmfernandez 1.0
@jmfernandez
Error when fetching workfile from local directory
#139 opened Dec 9, 2024 by wkwi2r
@jmfernandez
1
Explore using bioblend for Galaxy remote workflow execution
#130 opened Nov 6, 2024 by jmfernandez 2.x
@jmfernandez
1
Misidentified workflow entrypoint from WorkflowHub entry bug Something isn't working
#128 opened Oct 16, 2024 by jmfernandez 1.0
@jmfernandez
5
Annotate generated images with opencontainers annotations
#123 opened Oct 6, 2024 by jmfernandez 1.0
Integrate docstr-coverage , in order measure internal code documentation coverage
#122 opened Oct 4, 2024 by jmfernandez 1.0
@jmfernandez
Restrict max version of Nextflow engine for DSL1 workflows
#121 opened Sep 24, 2024 by jmfernandez 1.0
@jmfernandez
Allow importing RO-Crates in complex scenarios
#114 opened Aug 28, 2024 by jmfernandez
dot dependency should be optional
#72 opened Oct 9, 2023 by jmfernandez
@jmfernandez
Error while running WfExS using a local workflow file/directory
#46 opened Jul 7, 2023 by dcl10
7
Introduce codemeta.json
#39 opened Mar 22, 2023 by jmfernandez
Use pyinvoke and Fabric
#36 opened Feb 8, 2023 by jmfernandez 2.x
Add several checks in the code to detect containers unavailable for the current hardware architecture
#34 opened Jan 30, 2023 by jmfernandez
@jmfernandez
Add support to dav and davs schemes enhancement New feature or request
#25 opened Feb 25, 2022 by jmfernandez 0.9.x
@jmfernandez
1
Record the licence of the workflow in RO-Crate
#19 opened Oct 20, 2021 by jmfernandez 0.9.x
@lrodrin
Add support for insdc.sra CURIE enhancement New feature or request
#17 opened Sep 30, 2021 by jmfernandez 0.9.x
@jmfernandez
Add support to RO-Crate Submission API from WorkflowHub enhancement New feature or request
#12 opened Jul 8, 2021 by lrodrin 0.9.x
2
Add validation capabilities over fetched contents
#10 opened Jun 22, 2021 by jmfernandez
1
Fetch and store association from workflow step to container from CWL
#8 opened Jun 2, 2021 by jmfernandez
Fetch and store the association process -> container from running Nextflow
#7 opened Jun 2, 2021 by jmfernandez
Try generating an abstract CWL from a Nextflow workflow
#6 opened Jun 2, 2021 by jmfernandez
Generate abstract CWL from Nextflow execution
#5 opened Jun 2, 2021 by jmfernandez
Add support to encode CURIE
#3 opened May 14, 2021 by jmfernandez
Create a metadata database to hold upstream metadata associated to remote contents
#2 opened May 14, 2021 by jmfernandez
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