Build Wheels #2
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| name: Build | |
| on: [workflow_dispatch] | |
| jobs: | |
| build: | |
| name: "Build" | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: "actions/checkout@v4" | |
| with: | |
| fetch-depth: 0 | |
| submodules: "recursive" | |
| # Setup env | |
| - uses: "actions/setup-python@v5" | |
| with: | |
| python-version: "3.12" | |
| - name: Installs for Python 3.12 | |
| run: | | |
| python --version | |
| pip install --upgrade pip wheel setuptools pybind11 | |
| - name: Setup Lib Dependencies | |
| run: | | |
| apt-get install -y libeigen3-dev libboost-all-dev | |
| - name: Setup Cpp | |
| uses: aminya/setup-cpp@v1 | |
| with: | |
| cmake: true | |
| - name: Setup IQTree | |
| run: | | |
| cd iqtree2 | |
| git apply ../fpic-iqtree.patch | |
| mkdir build && cd build | |
| cmake -DIQTREE_FLAGS="single" -DBUILD_LIB=ON .. | |
| - name: Build IQTree | |
| run: | | |
| make -j | |
| cd ../.. | |
| mv iqtree2/build/libiqtree2.a pyiqtree/libiqtree/ | |
| - name: Build PyIQTree | |
| run: python setup.py build | |
| - name: Install PyIQTree | |
| run: python setup.py install | |
| - name: Test | |
| run: | | |
| pytest tests/test_RF_distance.py | |
| pytest tests/test_generate_random_tree_file.py |