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[MRG] Added data check on axes in test_gui.py #726

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merged 8 commits into from
Mar 13, 2024
Merged

[MRG] Added data check on axes in test_gui.py #726

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2e430ed
add data check on axes in `test_gui.py`
samadpls Mar 12, 2024
9a75ec7
refactored
samadpls Mar 12, 2024
9883700
Added tests for GUI visualization features
samadpls Mar 12, 2024
be28a32
fixed linting error
samadpls Mar 12, 2024
26f2816
added doc string
samadpls Mar 13, 2024
322fe1e
Remove unnecessary code assertions
samadpls Mar 13, 2024
27b9ddf
Refactor visualization test
samadpls Mar 13, 2024
09d1e1e
refactor
samadpls Mar 13, 2024
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113 changes: 111 additions & 2 deletions hnn_core/tests/test_gui.py
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Original file line number Diff line number Diff line change
Expand Up @@ -46,8 +46,8 @@ def test_gui_upload_params():
original_tstep = gui.widget_dt.value
gui.widget_dt.value = 1
# simulate upload default.json
file1_url = "https://raw.githubusercontent.com/jonescompneurolab/hnn-core/master/hnn_core/param/default.json" # noqa
file2_url = "https://raw.githubusercontent.com/jonescompneurolab/hnn-core/master/hnn_core/param/gamma_L5weak_L2weak.json" # noqa
file1_url = "https://raw.githubusercontent.com/jonescompneurolab/hnn-core/master/hnn_core/param/default.json" # noqa
file2_url = "https://raw.githubusercontent.com/jonescompneurolab/hnn-core/master/hnn_core/param/gamma_L5weak_L2weak.json" # noqa
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gui._simulate_upload_connectivity(file1_url)
gui._simulate_upload_drives(file1_url)

Expand Down Expand Up @@ -396,6 +396,7 @@ def test_gui_figure_overlay():


def test_gui_adaptive_spectrogram():
"""Test the adaptive spectrogram functionality of the HNNGUI."""
gui = HNNGUI()
gui.compose()
gui.params['N_pyr_x'] = 3
Expand All @@ -422,6 +423,114 @@ def test_gui_adaptive_spectrogram():
plt.close('all')


def test_gui_layer2_dipole():
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"""Test the visualization of layer 2 dipole in the HNNGUI."""
gui = HNNGUI()
gui.compose()
gui.params['N_pyr_x'] = 3
gui.params['N_pyr_y'] = 3

gui.run_button.click()
figid = 1
figname = f'Figure {figid}'
axname = 'ax1'
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'layer2 dipole', {}, 'clear')
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'layer2 dipole', {}, 'plot')
# Check if data is plotted on the axes
assert len(gui.viz_manager.figs[figid].axes) == 2
# Check default figs have data on their axis
assert gui.viz_manager.figs[figid].axes[1].has_data()
plt.close('all')


def test_gui_layer5_dipole():
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"""Test the visualization of layer 5 dipole in the HNNGUI."""
gui = HNNGUI()
gui.compose()
gui.params['N_pyr_x'] = 3
gui.params['N_pyr_y'] = 3

gui.run_button.click()
figid = 1
figname = f'Figure {figid}'
axname = 'ax1'
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'layer5 dipole', {}, 'clear')
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'layer5 dipole', {}, 'plot')
# Check if data is plotted on the axes
assert len(gui.viz_manager.figs[figid].axes) == 2
# Check default figs have data on their axis
assert gui.viz_manager.figs[figid].axes[1].has_data()
plt.close('all')


def test_gui_spikes():
"""Test the visualization of spikes in the GUI."""
gui = HNNGUI()
gui.compose()
gui.params['N_pyr_x'] = 3
gui.params['N_pyr_y'] = 3

gui.run_button.click()
figid = 1
figname = f'Figure {figid}'
axname = 'ax1'
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'spikes', {}, 'clear')
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'spikes', {}, 'plot')
# Check if data is plotted on the axes
assert len(gui.viz_manager.figs[figid].axes) == 2
# Check default figs have data on their axis
assert gui.viz_manager.figs[figid].axes[1].has_data()
plt.close('all')


def test_gui_psd():
"""Test the PSD visualization in the HNNGUI."""
gui = HNNGUI()
gui.compose()
gui.params['N_pyr_x'] = 3
gui.params['N_pyr_y'] = 3

gui.run_button.click()
figid = 1
figname = f'Figure {figid}'
axname = 'ax1'
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'PSD', {}, 'clear')
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'PSD', {}, 'plot')
# Check if data is plotted on the axes
assert len(gui.viz_manager.figs[figid].axes) == 2
# Check default figs have data on their axis
assert gui.viz_manager.figs[figid].axes[1].has_data()


def test_gui_network():
"""Test the network visualization functionality of the HNNGUI."""
gui = HNNGUI()
gui.compose()
gui.params['N_pyr_x'] = 3
gui.params['N_pyr_y'] = 3

gui.run_button.click()
figid = 1
figname = f'Figure {figid}'
axname = 'ax1'
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'network', {}, 'clear')
gui._simulate_viz_action("edit_figure", figname, axname, 'default',
'network', {}, 'plot')
# Check if data is plotted on the axes
assert len(gui.viz_manager.figs[figid].axes) == 2
# Check default figs have data on their axis
assert gui.viz_manager.figs[figid].axes[1].has_data()


def test_unlink_relink_widget():
"""Tests the unlinking and relinking of widgets decorator."""

Expand Down