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Demultiplexing Tool - determines the level of index swapping and undetermined index-pairs, before and after quality filtering of index reads.

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Name		Name	Last commit message	Last commit date
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Assignment-the-first		Assignment-the-first
Assignment-the-second		Assignment-the-second
Assignment-the-third		Assignment-the-third
TEST-input_FASTQ		TEST-input_FASTQ
TEST-output_FASTQ		TEST-output_FASTQ
.gitignore		.gitignore
LAB_NOTEBOOK.md		LAB_NOTEBOOK.md
README.md		README.md

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Demultiplexing

Assignment the First

Part 1: Quality Score Distribution per-nucleotide
Part 2: Develop an algorithm using psuedocode to de-multiplex the samples

Assignment the Second

Review peer psuedocode

Assignment the Third

Write the code

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Demultiplexing Tool - determines the level of index swapping and undetermined index-pairs, before and after quality filtering of index reads.

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