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262 Open 742 Closed
262 Open 742 Closed
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Issues list

"funannotate remote -m phobius" stops processing my file
#1070 opened Oct 4, 2024 by alpargata97
Augustus Training Error: Missing ExonModel File and UnboundLocalError in Funannotate v1.8.17 Despite Pretrained Species Use
#1069 opened Sep 20, 2024 by kalonji08
3
Funannotate compare
#1067 opened Sep 11, 2024 by Niohuruzh
installing databases failed
#1066 opened Sep 2, 2024 by jacob-israel
4
cannot install funannotate, Executing transaction allthe time.
#1065 opened Aug 31, 2024 by winteraatt
1
funannotate-predict.py: error: unrecognized arguments: --stopCodonExcludedFromCDS=False
#1064 opened Aug 28, 2024 by wangpeng-design
3
Unique proteins from Funannotate compare
#1063 opened Aug 26, 2024 by manjumoorthy95
funannotate compare fails at diamond
#1062 opened Aug 22, 2024 by jsimba-99
2
Funannotate Installation : How to configure funannotate app find the Trimmomatic program?
#1061 opened Aug 21, 2024 by jacob-israel
5
funannotate annotate uses $FUNANNOTATE_DB over -d /path/to/databases for go.obo
#1059 opened Aug 11, 2024 by mjacksonhill
2
Setup of funannotate databases fails
#1058 opened Jul 25, 2024 by ekg123
3
Funannotate train failing when using mysql due to socket error
#1056 opened Jul 13, 2024 by monkfromouterspace
2
Issues with multiple transcripts: MEROPs, BUSCO, PFAM and dbCAN/CAZyme annotations missing for T2 transcripts from final annotation file
#1055 opened Jul 12, 2024 by calizilla
URL update needed for the latest MEROPs database file
#1054 opened Jul 11, 2024 by calizilla
5
Augustus installation error ( When I use the make command it gives this error)
#1053 opened Jul 7, 2024 by pvshekar
Parsing uniprot blast hits
#1052 opened Jun 26, 2024 by SnuniKVC
linux/arm64 docker image
#1050 opened Jun 23, 2024 by JLSteenwyk
2
genemark probuild takes too long
#1048 opened Jun 12, 2024 by sqwwww
funannotate test failing at predict step
#1047 opened Jun 10, 2024 by pwkooij
6
question about the busco version in funannotate
#1046 opened Jun 10, 2024 by dingxm
How to fix a local variable in gff3
#1044 opened May 21, 2024 by yumi-nakadera
4
funannotate remote does not recognise predict_results folder
#1043 opened May 20, 2024 by ydanylko
7
Evidence modeler has failed, exiting
#1042 opened May 17, 2024 by genbuf
3
When running funannotate compare, comparison of 2 species succeeds but comparison of 3 species fails
#1041 opened May 17, 2024 by liuyca1
Funannotate compare
#1040 opened May 14, 2024 by danielabermeo8
1
ProTip! What’s not been updated in a month: updated:<2024-09-05.